Trichogramma pretiosum: 106659779
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Entry
106659779 CDS
T07644
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106659779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106659779
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106659779
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_NUP160_120_M
TPR_4
TPR_8
Exo84_C
Motif
Other DBs
NCBI-GeneID:
106659779
NCBI-ProteinID:
XP_014237956
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MSTNESANTAATASEAKDSSSGSTNATTAATSKDNNGPAGTSGTGAASTTTAATTTTTAN
NPSAVPLTTQERELARTTEEEYAAGNYAAAAAALAQLEQLRPQDLKVTHNKILADYQCST
EPRKHDILKKSLNAICPLPASCQQATHGPNTAPSGFDGDEIERAVIRYNQAVILYHFKQY
QAALQIVAGLFALNEPMEESFVHKICVLLVELHLALGRPDSALALVNYIENQFICTPDAS
KSALGEQGPNQKQDVSGKAAPKTIASVVASNNSVDKEKETKEAKKDCMDVATDVFKMKLL
KYKLRIYYQTLQVNLCKKEWKTLVKLGMPINPCTIFLKANMEYLRKNYKKAMKLLDSLKI
NQVIPEFKACGESIPVLYYNNMASIHFAMGKTNLACFYLNAAIKENSKAMESVENSNNST
NTPNKLYTIQKSKHCELMYGMGISLLHTEQPTKAFDCFIEASQQFHNSPRLWLRMAECCI
MCHKPTNKADFDIPGRRKDILQKIVGENNNGVSKKFILATSLSKSCKYHPEGLSYAIPQP
TLEYGMLCLKNALFLLPITERDEITLPSTSSLCEDGVKKSIMGQQQSTSLLGSFTTSSNS
KLGNNSNSTPSNPNRSVASQSTIAENLNLKISILSASAYTALCLGDYVSSLNYAKSLLSI
KKLPGAHVLLGNLYAAECLIFLNRIQEASEYLKPELLQDVDTFVPIETEVSNPPKEDSFK
EVNDNKSIKDRWYPTNVQTAKAILSYNLAVVYAVKGELEKSGQILKQVWTSKSPECDVPI
HVIMLALYIELQLGHIEVARSLIKQHFCSTVTQQYQA
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgaacgagtcggcgaacaccgctgccacggcatccgaggccaaagactcgtct
tcggggtccactaatgcaacgacagccgctacctcgaaggacaacaacggtccagccggc
acatcgggaactggcgcggcgtcgacgacgacggcggccacgaccacgacgacggccaac
aatccgtcagccgtgcctctgaccacacaggagcgcgagctcgcccgcacgaccgaggag
gagtacgccgcgggcaattacgccgccgcggcggcggctctcgcccagctggagcagctc
aggccgcaggacctcaaggtcacgcacaacaagatactggccgactatcagtgcagcacg
gagccgcgcaagcacgacatcctgaagaagagcctcaacgccatttgcccgctgccggcc
agctgccagcaggcgacgcacggccccaacacggcgccctcgggcttcgacggcgacgag
atcgagcgcgccgtgatcaggtacaatcaggctgtcatactgtatcacttcaagcagtat
caggctgccctgcagatcgtcgccggcctctttgccctcaacgagcccatggaggagagt
tttgtgcacaaaatttgtgtgttattggttgaacttcatttggctctgggtagaccagac
tctgctcttgcacttgtcaattatatagaaaatcagtttatttgtacacctgatgcttcc
aagtcagctttaggggagcaaggtccaaaccagaagcaagatgtatccggtaaagctgct
ccaaaaaccattgcctccgtagttgcctctaacaacagtgtagataaagagaaagaaaca
aaagaagcaaagaaagattgtatggacgtagccacggatgttttcaaaatgaaacttttg
aaatacaaactaagaatttattaccaaactctgcaagtgaacctttgtaagaaggaatgg
aaaactttggtaaagttgggcatgccaattaacccttgtacaatatttctaaaagctaac
atggaatatttgcgaaagaattacaaaaaagcaatgaaacttctggactctcttaaaatt
aatcaagttataccagaattcaaggcttgtggagaatcgattccagttctatattataac
aacatggctagtattcactttgcaatgggaaaaaccaatctagcttgcttttatttaaat
gctgctatcaaagaaaattcaaaagcaatggaaagtgttgaaaattcaaataattctact
aatacaccaaataaattatataccattcaaaaatcaaagcattgtgaactgatgtatgga
atgggaatcagtttgttgcatacagaacaaccaacaaaagcttttgactgtttcattgaa
gcttctcaacaatttcacaatagtccaaggctttggctacgcatggcagagtgctgtatt
atgtgtcataaacctacaaacaaggctgattttgatattcctgggagacgcaaagatatt
ttacaaaaaattgttggagaaaataacaatggagtaagcaagaaattcatcctagctact
tctttatctaaaagttgtaaataccatcctgaagggctctcttatgcaatacctcaacca
acattagaatatggaatgctgtgtctgaaaaatgcattatttttactacccatcactgaa
agagatgaaattacgttacctagtacaagttcgttatgtgaagatggagttaaaaagtct
ataatgggtcaacaacaatcaacaagtttactaggatcatttacaacatctagtaacagt
aaattaggtaacaactccaacagcacgccatcaaatccaaatcgatctgtagcatctcaa
tcaacaatagcagaaaatttaaatttaaaaattagtatattatcagctagtgcctatact
gccttgtgcctaggtgattacgtttcttccttgaattatgccaaatcacttttaagcata
aaaaaattaccaggggcccatgttttgttgggtaatttatatgctgctgagtgtttaatt
ttcctaaatagaatacaagaagcttcagagtatttgaaaccagaacttctacaagatgtt
gatacttttgttcctattgaaacagaagtttcaaatccacctaaagaagactccttcaag
gaagttaatgataataaatcaatcaaagatcgttggtacccaaccaatgttcagaccgcc
aaagcaatacttagttataacttagctgtagtatatgcagttaaaggagagctcgaaaag
tcgggacaaattttgaaacaggtctggacttcaaagagcccagaatgtgatgtacctata
cacgttataatgctagctttgtatatagaattacaattgggccacattgaagttgctcgc
tcgctgattaaacaacatttttgttcaacagttactcaacagtatcaggcgtaa
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