Trichogramma pretiosum: 106659822
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Entry
106659822 CDS
T07644
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03022
Basal transcription factors
tpre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106659822
09124 Replication and repair
03420 Nucleotide excision repair
106659822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpre03021
]
106659822
03400 DNA repair and recombination proteins [BR:
tpre03400
]
106659822
Transcription machinery [BR:
tpre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106659822
DNA repair and recombination proteins [BR:
tpre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106659822
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
DUF3334
Eno-Rase_FAD_bd
Motif
Other DBs
NCBI-GeneID:
106659822
NCBI-ProteinID:
XP_014238020
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MTTSSEEILMQVEKVKYKKSDGTLYVMSERLAWILDEKDTVSLSHNYADIKTQKISPEGK
PKIQLQVVMHDGSSSTFHFVNPDGQEAQIRDRNLIKELLQQLLPKFQKKVNKELEEKNRL
LQENPTLLQLYKDLVITGVITSEEFWAQHATQYTEASKAPRQEIGVNSAFLADIKPQTDG
CNGLKYNLTIDIINCIFKTYPAVKKKHQENVPAKMTESEFWTKFFQSHYFHRDRMNQGTK
DIFTECAKIDDQEMKKDVQAGVNDPMVDITGFDDINMEEIYVDTNKPEKSTGNIVHQNMI
KRFNQHSIMVMKANIAKQTENEKPHTNGSTSPKKANNNNADSHNSSPQAKKRRIQEKLVY
EDLESNLETQRNEEPLVLEHVDRYLHGPVSNVENITDMEHLKSAAAFMVRETERWSRENF
LPRQPSSSLVYPPAAVAALGELTPGGYLMKGFREDSLSQMIPHELERDLASVYVCTCELL
KHFWRAFPATTPQLEEKVIRMHTALRNFHNVKLMPFEDRLQREYSVVSQHLTAHLNQLLN
AAYRKYIVFQNRKTERSR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgacgacttcctcggaggagattctgatgcaggtcgagaaggttaagtacaagaagagc
gatggcacgctctacgtcatgagcgagagactcgcttggatactcgatgagaaggacacc
gtgtcgctcagtcacaattacgctgatatcaaaactcaaaagatctcgcccgaaggcaag
ccaaagattcagctccaggttgtcatgcacgatggatcgtcctcgacttttcattttgtc
aatccggatgggcaagaggcacagatcagagacagaaatctcatcaaggaactgctgcaa
cagctactgcctaaatttcagaagaaagtcaacaaggaattggaagaaaagaataggtta
ctgcaagaaaatccaactttgctacagctttacaaagatttagtaataacaggcgttata
acgtcagaagaattttgggctcagcatgctactcaatatacagaagcaagtaaagcacct
cgtcaagaaattggtgtaaacagtgccttcttagctgatattaaaccacaaactgatggt
tgcaatggattaaaatataatttaacgatagatattattaattgtatattcaaaacatac
ccagctgtcaaaaagaagcatcaagaaaatgtgcctgccaaaatgacagaatccgagttt
tggacaaagtttttccaatctcattattttcacagagatcgtatgaaccaagggaccaaa
gatatttttactgaatgtgcaaagattgatgatcaagagatgaaaaaagatgttcaagca
ggagtgaacgatcctatggtagatattactggctttgatgatattaatatggaagaaata
tacgttgatacaaacaagccagaaaaatccactggaaacatagttcatcaaaatatgatt
aaacgatttaatcaacatagtattatggtgatgaaagcaaatattgctaaacaaactgag
aatgaaaagccacatactaatggttctacttctcccaaaaaagctaataacaataatgca
gattcacataatagttctccccaggctaagaaacgccgtatacaagaaaaattagtttat
gaggatcttgaatcaaatttagaaactcagaggaatgaagaacctttagttttagaacat
gttgatagatatttacatgggccggtgtcaaatgtggaaaatattacagatatggaacac
ttaaaatctgcagcagcatttatggtgagagaaacagaaaggtggtccagggaaaatttt
ttgccgaggcaaccatcttcatcgttagtgtaccctcctgctgctgtggcagctttagga
gagctgacgccaggtggatatctaatgaaaggttttcgtgaagatagtctcagccaaatg
atacctcatgaattagaacgagaccttgcaagcgtttacgtatgcacttgtgaattattg
aagcatttttggagagctttcccagccacgacgccacagctcgaagaaaaagtcatcaga
atgcacacggcactgcgaaattttcacaatgtcaagctaatgccgttcgaggatcgccta
caaagagagtactcggttgtgagccagcacttgaccgctcacttgaatcaactgctcaac
gctgcctacagaaagtacatcgtctttcagaaccgtaaaactgaaagatcgagataa
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