Trichogramma pretiosum: 106659826
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Entry
106659826 CDS
T07644
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
tpre
Trichogramma pretiosum
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpre03041
]
106659826
03009 Ribosome biogenesis [BR:
tpre03009
]
106659826
Enzymes [BR:
tpre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106659826
Spliceosome [BR:
tpre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106659826
Ribosome biogenesis [BR:
tpre03009
]
Eukaryotic type
Pre-60S particles
Helicases
106659826
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
AAA_22
Tir_receptor_C
PRK
Motif
Other DBs
NCBI-GeneID:
106659826
NCBI-ProteinID:
XP_014238026
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MDLIKTIESDQEIEDLSEPSDEEDDFQPRRKEKKKDTGLGGDFVLNSEDFEHDTWNDLSK
YIKRKAKTKLDDKIKKVRNSSKAENSASVENLDDAEDENDLFVEEEDLQKDTIKTKLKKT
KKGKAVEEQEEMKFEVVENYDNLASFENLNISRPLLKAISTMKYYNPTPIQAATIPVALL
GRDICGCAATGTGKTAAYMLPTLERLLYRPAGGTPVTRVLVLVPTRELGVQVYQVTKQLA
QFTSIEVGLSVGGLDVKVQESVLRKNPDIVIATPGRLIDHLANAPTFTLNTIEVLILDEA
DRMLDEYFAEQMKHIVKQCSRTRQTMLFSATMTEEVKELAAVSLDKPVKVFVDSNQDVAS
ALRQEFIRIRKEREGDREAVLAALVCRTFHDHTMIFVQTKKQAHRLHILLGLLGVKVGEL
HGNLTQPQRLESLRKFKDEEVDVLIATDVAARGLDISGVKTVINFVMPATLQHYIHRVGR
TARAGRGGVSVSLAGEQERQLVNEVIKQAKNPVKRRIIPIKIIEKYNKKLQSLEPDVEKI
LNEEREERELAKCQNQTNRIENMLKDENNTDQRVWFQSQKDRNLEKKKLQDKPEKDKSAK
TPKDKSDKKPDKKSKKPAKKLDPAEERALQELNKVAAFQARMAKKNIKPKKMRSCVDATA
PEDRTRVKKRKASSFASDLTDTSRKNVKRMRYEANTKKNQKASKSMKKAKMKGIKPKGNP
NPKRR
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggatttaattaaaacaatcgagagtgatcaggagatcgaggatctgtcagaaccttcc
gacgaagaagatgactttcaaccacgtagaaaggaaaaaaagaaggacaccggcttggga
ggtgactttgttctcaacagtgaagacttcgagcacgatacttggaacgatttgagcaaa
tatatcaaacgtaaagccaaaaccaagcttgatgacaaaatcaagaaagtgagaaattcc
agtaaggctgagaatagtgcatcagtagagaatcttgacgatgctgaagatgagaatgac
ttgttcgtcgaagaggaagatcttcaaaaagataccattaaaaccaagttgaaaaaaact
aaaaaagggaaagccgtagaggaacaagaagaaatgaagtttgaggttgtcgaaaattat
gacaacttagcttcatttgagaatctaaacatttccagaccacttcttaaagctataagt
acaatgaaatactacaatccaactcctatacaagctgcaacaataccagttgcgttatta
ggtagagatatttgtggatgcgctgcaacaggtacaggaaaaactgctgcctatatgctt
ccaactttggaaagattattgtacagaccagctggagggactccagttactagagttttg
gttcttgttcccactcgagagttgggtgttcaagtatatcaagtaactaagcaattggca
cagttcacttcaattgaagtaggattgtcagttggtggtttagatgtgaaagtacaggaa
agtgttctgagaaaaaatccagacattgttattgccactcctggtcgtttgattgatcat
ttagccaatgcaccaacttttactttaaatacaattgaagtattaattttggatgaagct
gatagaatgttggatgagtattttgctgaacagatgaaacatattgtcaagcagtgctct
agaactcgacaaaccatgctcttctcagctaccatgactgaagaagtaaaagaattagct
gctgtttctctcgacaagccagtcaaagtttttgttgacagcaatcaagatgttgcttct
gctttacgacaagaatttattagaattcgtaaagaaagagaaggcgatcgagaagcagta
ctagctgccctggtatgccgtaccttccatgatcacaccatgatttttgtacaaaccaaa
aagcaagctcaccgattacacattttgttagggcttctaggagtcaaggtcggagagctt
cacggtaatttaacgcagcctcaacgattggaaagtttgagaaaattcaaagacgaagaa
gtagacgttttgatagcgacggatgttgcggccagaggtctggatatcagcggcgtcaaa
accgtcattaatttcgtgatgccagcgacgttgcagcactacatccacagggtcggccga
actgctcgtgcgggtcgaggtggtgtgtcggtctcgctggccggtgagcaggaacgtcag
ctggtcaacgaagtcatcaagcaggcgaaaaatccagtgaaacgccgtatcataccgatc
aagataatcgaaaagtataacaaaaagcttcagtcgctggagcccgacgttgaaaagatc
ctcaacgaggagagggaagagcgagaattggccaagtgccaaaatcaaaccaaccgcatc
gagaacatgttgaaggacgaaaacaacacagatcaacgagtctggttccaatcgcagaag
gatagaaatttggagaaaaaaaaactgcaagacaaaccagagaaggataagtctgccaag
acgcctaaagataaatccgataaaaagcctgacaagaaatcgaaaaaaccagcaaagaag
ttggatccagctgaagaacgagctttgcaagaattgaacaaagtcgcagcttttcaagcg
cgtatggcaaagaagaacatcaaaccgaagaagatgaggtcttgcgtggatgctactgct
cctgaagaccgtaccagagtcaagaagaggaaggcttcgtccttcgctagcgatctgaca
gatacaagcagaaagaacgtcaagagaatgcgatacgaagcaaataccaaaaagaaccag
aaggcaagcaaatcaatgaaaaaggctaaaatgaagggtattaaacccaagggcaatccc
aatccaaaaagacgttaa
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