Trichogramma pretiosum: 106660080
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Entry
106660080 CDS
T07644
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106660080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106660080
03032 DNA replication proteins [BR:
tpre03032
]
106660080
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
106660080
mRNA cycle factors
Common to processing body (P body) and stress granule
106660080
DNA replication proteins [BR:
tpre03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
106660080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
PerB
ARMC9_ARM
Nsp1_C
TPR_17
WIYLD
Motif
Other DBs
NCBI-GeneID:
106660080
NCBI-ProteinID:
XP_014238400
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MNNFSSNAIDTKRLHRRLGEIVKSIEETNSYALTVAEVFSIERETLRSKLKTYCEKLILE
DPIFYVPKTEELLWRQGYHNVVGLVNKLQHGNLDEDGKLLLASHLESGIGFYQKLITHLH
NKFCIQDQRVDYTCWSKAGNFTEKYNQDKLSTEIKNCVSRFTQRCYICLGDLARYRLKLN
LEPDWNPSIASRFYKTAITLDPKNGMPYNQLAHLAGDKNYGLDAVYYFLKCTICPKPFPG
SERNLESTILKYSRGSTDEDNNIKNFVAKFCKILISWRHKSSHFNNSHLKESTIQQDLEN
CLNAINLDLIDHKSIDNNSISENSLKNEKNYSANYFTFKLMAICLMEISKKQNNDNHRVI
KFMLEFVEELLKFSNGKLQDYLSNVPQLSPSSSRNSLIDVTTCVNLTSDMNIKDDSTKEK
PEELNIKENGIDDTQNAFKKALPLILKGRRKRRVKIYSDSSDDESDDGICKSPYRRTNGT
YYSDESSSDDELSDSSDEVHTDYSTTTVTSEDQKVGKEIEAQCSSTVGENTVFAKNIDSR
KPQQSLENVIQGMGEEKMLSAIKIFCDWLHGRQDVIHTFSNQLKTVMEHFTTMLNLINID
SYDVFQSFTFENGTSLKNNIKLEAAPLPEDVELRNMTIFQQAHSEIDWEFFVTKTMTRCE
EAYLRVSRIIKFGMQLCSVKKSGLRYDEESHTFIYNCPEEREFVRSQVLKPPQKIIINPS
KELLMKNMAQLWREEKEEENKSKGDVQLLPPYLVPDHEALTRYLAIIKHLVYSKQFIIVI
PLTVLSALDEMKKFSIQAREVTRWLEKLLKNGSQYVRLQKDNEKLPLQLAPPKRGEKVSW
RYYNIFKCCLFFSETKPEEDLVRLLTGFSDSGLNLNHMNELTNSTGIKYEHIGSFHAKWK
KAFGNHG
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacttttcaagcaacgctatcgatactaaacggttgcataggcgactaggtgaa
atagtaaaatctattgaggaaacgaatagctatgctctaactgtcgctgaagtattttct
attgaaagagaaacacttcgttcaaagctaaaaacttactgtgagaaactgattttagaa
gatcctatcttttatgtaccaaaaacagaggagttattatggagacaaggatatcataat
gttgttggacttgttaataaactacaacatggaaatctagatgaagatggaaaactttta
ttagcatctcacttggaaagtggaattggattttatcaaaaactaataactcatttacat
aataaattttgtatacaagaccaacgagtagattatacatgctggtcaaaggctggaaat
tttactgaaaagtataaccaagataagctttcaacagaaataaaaaattgcgtttcccgc
tttactcaacggtgttacatatgtctgggagatttagccagatacagattaaaactaaat
ttagagcctgactggaatccatctattgcttcaagattttataaaacggcaataacatta
gatccaaaaaatggaatgccttataatcaattggcgcatcttgctggagacaaaaattat
ggattggatgcagtttattactttctgaaatgtacaatttgcccaaaaccatttcctggt
tcagagagaaatcttgagagtactattttaaaatattctcgtggctctacagatgaagac
aacaatatcaaaaattttgttgcaaaattttgcaaaattttgatatcatggcgtcataaa
agttctcatttcaataattctcatttaaaagaaagtacaatacagcaagacttagagaat
tgcttgaatgcaataaatttggacttgattgatcacaaatctatagataataatagtatc
tctgaaaattctttgaaaaatgaaaaaaactattctgcaaattattttactttcaaattg
atggccatttgtttaatggagatttctaaaaagcaaaataatgataatcatagagtaata
aaatttatgctagaatttgttgaagagctgttgaagttttctaatggaaaattgcaagat
tatctttcaaatgtgcctcaattaagtccatcttcaagtcgaaacagtttaatagatgtc
acaacatgtgtcaatcttacttctgatatgaatattaaagatgattctacaaaagaaaaa
ccagaagaattgaatataaaagagaatggcattgatgatacacaaaatgctttcaaaaaa
gcccttccattgattctgaaaggcagaagaaaacggagagtgaaaatttattctgattct
agtgatgatgagtcagatgatggaatatgtaaaagtccttatagaaggacaaatggaaca
tactatagtgatgaatcttcatcagatgatgagttatctgattcttcagatgaggttcat
actgattacagtacaactacagtaacgagtgaagatcaaaaagttggaaaagaaattgaa
gctcaatgttccagcacagttggtgaaaatactgtttttgcaaaaaatatagatagtaga
aagcctcaacaaagtcttgaaaatgttattcaaggtatgggagaggaaaaaatgttgagt
gcaataaaaattttctgtgactggttacatggtagacaggatgttatacatactttttcc
aatcaattaaaaacagttatggaacactttacaactatgttgaacctgataaacattgat
agctatgatgtctttcaatcttttacttttgagaatggtacttctttgaaaaataacatc
aaacttgaagcagcacctttaccagaagatgtggagttgagaaatatgacaatttttcaa
caagctcattctgaaattgactgggaattttttgtcacaaaaacaatgacccgttgtgag
gaagcttatttgagagtatctagaataattaaatttggtatgcagttatgctctgtaaaa
aaatcaggattaagatatgatgaagaaagtcatacattcatttataattgtcctgaagag
cgagagtttgtaagatctcaagtattgaaacctccacagaaaataattatcaatccctca
aaagaattactcatgaaaaatatggctcaattgtggagagaagaaaaagaagaggaaaat
aaatccaaaggagatgttcaattattaccaccatacttagttcctgatcatgaggcttta
acaagatatctggctatcataaaacatcttgtttactctaaacaatttatcattgtcata
ccattaacagttttatcagctctagatgaaatgaaaaagtttagtattcaagccagagaa
gttactagatggttagagaagctgttgaaaaatggatcgcaatacgtaaggctacaaaag
gataatgaaaaactacctctgcaattggcaccacccaaacgtggagaaaaagttagttgg
cggtactataatatattcaagtgttgcctattcttcagtgagaccaaaccagaagaagat
ttggtgcgattgctaaccggtttttctgatagcggtttaaatttaaaccacatgaatgaa
ttaacaaacagtactggcataaagtatgagcatattggatctttccatgccaagtggaaa
aaggcttttggaaatcatggttga
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