Trichogramma pretiosum: 106660515
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Entry
106660515 CDS
T07644
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106660515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106660515
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106660515
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
106660515
NCBI-ProteinID:
XP_014238978
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MADENEDQWLYGDAVDPKDPPNSNNELSDNNESKYNNDDASYQQSEDARDDLNDEQQMQQ
LRELQQLEAMGQSDNCQDIEPFDEDDSNTQQPLPSQDEDSMTNDAKLNGTSEKIKRESRD
NSNTETDDDDDDVDVVIGDIKSTPPQASQQYNSLNIKRGLLTTSTTAQEKLKQQQSGKFS
IDEFETIGSINGIPAHEFNLDTLEDKPWRQPGADITDYFNYGFNEETWRAYCERQKRMRS
ESGAGLILNTGTGAPPENSVAPGGARVPQVTITNYNSKYSGISGPKRAGPPPGRKMAGTI
DVIGSTGLGSRRNSEKSPPKENVIQVMTADRREYSRKPPVFPDVSVPPPVPNPIPPAFNM
PPPGFPHPEPVPSYFLPEPDPYYNSYEPTQDRQWGNDPTWQPSNINIPLTGDEMKDSRKS
LSMRDRDRERERIRGRDDRERDYDEIRERERDREREREKDPRRDEREIESVTREDERNRS
RSQYRHKESRHRHRSRSRSRRHKSRSKSPSRRKKKSRRSERERSKEESD
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaaaacgaagaccagtggttatacggcgatgccgttgatcccaaagatcca
ccaaattccaataatgagctcagtgataataacgaatccaaatacaataacgacgatgcg
tcttatcaacaaagtgaagacgctcgagacgatcttaacgacgagcaacaaatgcaacag
ttacgcgagttgcaacagttggaagctatggggcaatctgacaactgtcaagatattgag
ccttttgatgaagatgatagcaatactcagcagcctctccctagtcaagatgaagattca
atgactaacgatgccaagttaaatggaactagtgaaaagattaaacgtgaaagccgagat
aactctaacaccgaaaccgatgatgatgatgatgatgtggacgttgtcattggtgatatc
aagtcaacacctcctcaagcttcgcaacaatataatagtctgaatattaaaagaggtttg
ctcacaacgtctactacagcacaagaaaagttaaaacaacagcagtctggcaaattcagt
attgatgaatttgaaacgataggttccattaatggaattcctgctcatgaatttaattta
gacactttagaagataaaccttggagacagcctggagcagatatcactgattatttcaat
tatggttttaatgaagaaacatggcgagcatattgtgaaagacagaaaagaatgagaagt
gaatctggtgctggtttaatactgaatactggaactggtgcacctcctgaaaattcagtt
gctccgggtggagcaagagtgccacaagttacaataactaattataatagtaagtactct
ggaataagtggacctaaaagagcaggacctcctccaggtagaaaaatggctggtactata
gatgttatcggaagtacaggattaggttcacgtagaaattctgaaaaatcaccaccaaaa
gaaaatgttatacaagtaatgacagctgatagaagagaatattcaagaaagccaccagtg
tttccagatgttagtgttccaccaccagttccaaatccgattccccctgcttttaatatg
cctcctcctggttttccacatcctgaaccagtaccatcatacttcttaccagaaccagat
ccatactacaacagttacgaaccaacacaagataggcaatggggaaatgatcctacttgg
cagccatcaaacataaacattcccctaactggtgatgaaatgaaagattcaagaaaatca
ttatcaatgagggaccgagaccgagaacgagaacgtattcgaggtagagatgaccgagaa
agagactacgatgaaatacgagagcgtgaaagagatagagaacgtgagcgagaaaaagat
ccaagaagagatgaacgcgaaattgaatcagttactcgagaagatgaacgtaacagatcg
aggtcccaatacagacataaagaaagcagacatcggcatcgttcgagatcgcggtcgaga
cgacacaagtcacgatcaaaaagtcctagtagacgaaaaaagaagtcaaggcgttcggaa
agagaacggtctaaagaagaaagcgattaa
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