KEGG   Trichogramma pretiosum: 106660585
Entry
106660585         CDS       T07644                                 
Name
(RefSeq) DNA repair protein RAD50
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
tpre  Trichogramma pretiosum
Pathway
tpre03440  Homologous recombination
tpre03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tpre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    106660585
   03450 Non-homologous end-joining
    106660585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tpre03032]
    106660585
   03400 DNA repair and recombination proteins [BR:tpre03400]
    106660585
DNA replication proteins [BR:tpre03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    106660585
DNA repair and recombination proteins [BR:tpre03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     106660585
    BRCA1-C complex
     106660585
   NHEJ (non-homologous end-joining)
    MRX complex
     106660585
SSDB
Motif
Pfam: AAA_23 SMC_N AAA_15 SbcC_Walker_B Rad50_zn_hook AAA_29 AAA_21 AAA_16 AAA_13 ABC_tran AAA_22 AAA_28
Other DBs
NCBI-GeneID: 106660585
NCBI-ProteinID: XP_014239118
LinkDB
Position
Unknown
AA seq 1556 aa
MSKVKDLEIRGIRNFGDETSKNRIHFSTPLTLILGPNGTGKTTIIEALKYVTSGEYPPDS
ERGKAFVHEPKLTSTHSVRGQVKAKIIDKHGNEIIVVRTCQVSRIKSGTLKFQALDNTLK
RFNPKTQQEATITSRCADIDREMLNAMGVSKPILNYVIFCHQEESNWPLEDGKKLKERFD
EIFDTSKYNKAMEAATKLIKDSTGKLNTLREREKGLAKIVEEVKDKEEHLRNCQTREEEA
TQKIKDIEDKIKPIDEQMIDFLDVQKEHKKIEEKLRMVESNYKMSKNYIENLKQHIKHIH
KGTLEELISKIETFDTNLTQKKDEQNIYIEELETLDRNERKIKNKLDDARTQLGALKQKQ
IEYHEKVGKRNELLSKALDTWEITHDSEFSETEVTSNMNLIKNKLDEFKLSMKDKLKENE
QEERYLQSVVDESRAHKTGIESEISLKQKEKEEIKHEINECRKKIKETGEAGTKLSIFES
NLQTATQQYENLLKDFNEESLKEELQKYNKQRKEYDSRITLLDQEINSLHKLSSMQAELE
LHQNQLKDKEVEISALKKKHSNNLMVFFGSETVPEKQLKKHIEKIHSSLLKEKNELSKEI
DNKQQKLTSLITTQKHKDAELEKAISELNENEMKVSEKCDGQDYDEILLLQERKVKSLQD
QRGIYANQKLMYEEFLKKMKKKTCCPLCDRGLGSAEEKQLEQKMLAEIKKSPQSLKQCEA
ELKQEQAHYDALQQLKPVTEEINKMQRIKIPQMRSQLSKTKSEIQKLDSDLENLKILISE
PENKLEVYKSMYSDVTLLDNHLAELDKLNSLIDEKKDSMSKAGKIGDRSMQEVQNERQAL
KKRFSTVETKAEEIQSKIQIGQEKVQKAREQKNKLNEEIIRVKQDMQALNQIKAKVKDLY
TKETSLEESLKVLRSNFVKAEEDLSLKVDELSSLKKKNREEQDKDMNFKSTINTVYHELE
IVQEEVKKFIKNKVEESLENVESIVKKLSTESEKLKESRESLEEKVRFLKELCMSEESGK
RDLENNLDLLKKQEKMEELKKDYNELQDELEELKYEQRKKKYNALYEEKEILEKEISTKQ
GSLIELDKTIKEIKRSLNKEDYRMARKNYKALTLELQVREEAIANLKSFTQVLDGAMIKF
HEERMATVNTMMKKLWTHVYGGNDTTSIQIRVQKTEGIGDKKRSYNYKLVQIKHSKEMDM
KGKCSAGQKVLASIIIRMALAETFCAECSVLALDEPTTNLDDENATNLAVTLSKVIQHRA
QHSKNFQLIVISHDEKFIGHLSNLSGKQMFHELYRNIDGYSLVRRRDMTDFRQHSQTQAS
ATYGGDPDFTEDEEDDNQEPNTIKKEIMINSDEEDINAKLMSNRARVAAAPAKKAPARQP
VAKKAPARTTAAAKKQPAKTMPTRQLDISSFRRPSTQSQVPTQISDDDDDDDDSPPRAGV
SRQVRRPTQCLPDSEEQMSAKSSKQITRKRSVIDDSPPRKTGKQVKKHALDLLDDSPPRS
TRQSKKREFTRLDDSPPTQRQTLDDLDDSPPKAQSRKRNLDLDSPPSSSHKKRAFF
NT seq 4671 nt   +upstreamnt  +downstreamnt
atgtccaaagtcaaggacctcgagattcgaggcatcagaaatttcggcgatgagacgtcg
aaaaatcgcatccacttctcgacgccgctcaccctgatcctcggcccgaacggcaccggc
aaaacgaccatcatcgaggccctcaagtatgtcacctccggggaatatccgccggactcg
gaacgcggcaaggccttcgttcacgagcccaagctgacctcgactcactcggtacgcggt
caagttaaagccaaaatcattgacaagcatggcaatgaaataattgttgtcaggacgtgt
caagtgtcaagaataaaaagtggcaccttaaaatttcaagcgctggacaacacattaaaa
cggttcaatccaaaaactcaacaggaagctactataactagcagatgcgcagatatcgac
agagaaatgctgaatgctatgggtgtttccaaaccaatcctcaactatgtcatattttgc
catcaggaagaatcaaattggccactcgaagatggtaaaaaattgaaggagagattcgat
gaaatttttgatacttctaaatacaataaggcaatggaagctgctacaaaattaattaag
gattcaactggcaagctaaatacattgagagaaagagaaaagggtttagctaaaattgtt
gaagaagtcaaagataaagaagaacatttgagaaattgtcaaacgagagaggaagaggca
acgcaaaaaataaaagatattgaagacaaaatcaaacctatcgatgagcaaatgattgat
tttcttgatgttcaaaaagaacataaaaaaatagaagaaaaattaagaatggttgaaagt
aattacaaaatgtccaaaaattatattgagaacttaaaacaacatattaaacatatacat
aaaggaaccctagaggaattaatttcaaaaattgaaacgtttgatacaaatcttactcag
aaaaaggatgaacagaacatatatattgaggaacttgaaactttggatcgaaatgaacgc
aaaataaaaaataagcttgatgatgctagaactcaattaggtgccttaaaacaaaagcaa
atagaatatcatgaaaaagttggtaaaagaaatgaattgttatccaaagctctggatact
tgggaaataacacatgattcagaattctctgaaacagaggtaacaagtaatatgaatctt
ataaaaaacaaattggatgaattcaaattatccatgaaggataaacttaaagaaaatgaa
caagaagagagatatttgcaaagtgtagttgatgagtcaagagctcataaaacaggaatt
gagtctgaaatatcattaaagcagaaagaaaaagaagaaattaaacacgaaatcaatgaa
tgtagaaaaaagattaaagagacaggtgaagctgggactaaattaagtatatttgagtct
aatttgcaaactgccacacagcagtatgagaatttgttaaaagatttcaatgaggaatct
ttaaaagaagagttacaaaagtacaacaaacaaagaaaagaatatgacagtcgcattaca
ctattagatcaagaaattaattctttacataaattaagttcaatgcaagcagaattggaa
ttacatcagaatcaattgaaagataaggaagttgaaatttcagctctgaaaaaaaaacat
tccaataacctgatggtattttttggatctgaaacagttccagaaaaacaattaaaaaag
cacattgaaaaaatacattcttctttgttaaaagaaaaaaatgaattatcaaaagagatt
gataataaacagcaaaaactgacaagtttaattactacacaaaagcataaagatgctgaa
ttggaaaaggccatttctgaactcaacgaaaatgagatgaaagtttcagaaaagtgtgat
ggacaagattatgatgaaattttattacttcaagaaagaaaagtaaaatctcttcaagac
caaagaggcatttacgcaaatcaaaaattaatgtatgaagaatttttgaagaaaatgaag
aaaaaaacatgttgtccactgtgtgatagagggttgggcagtgcagaagaaaaacaattg
gaacaaaaaatgcttgcagaaatcaaaaaaagtcctcagagcttgaagcaatgtgaagct
gaattaaaacaagaacaagctcattatgatgctttacaacaactcaaaccagtaacggaa
gaaattaataaaatgcaaagaattaaaattccacaaatgagatctcaattaagtaaaaca
aagagcgaaattcagaaattagactcagatcttgaaaatttgaaaattttgatatcagaa
ccagaaaataaactagaggtctataaaagcatgtacagtgatgtaacattattagataat
catcttgctgaactggataaattaaacagtcttattgatgaaaaaaaagattcaatgtca
aaagcaggtaaaattggtgatagaagtatgcaagaagttcagaacgagcgtcaagcttta
aagaaaaggtttagcactgtggaaacaaaagctgaggaaatccagtccaaaatacaaatt
ggtcaagagaaagttcaaaaggctagggagcaaaaaaataagctcaatgaagaaatcatc
agagtaaaacaagatatgcaagcgctcaatcaaataaaagcaaaagttaaagatttatac
actaaagaaacatctcttgaagaatctttaaaagtgttgcgatcaaattttgtcaaagct
gaagaagatttgtcactgaaagttgatgaattatctagtttaaagaaaaaaaatcgggaa
gagcaagataaagatatgaattttaaatcaacaatcaacacggtttatcacgagttagaa
attgttcaagaagaagtaaaaaaatttataaaaaacaaagtagaagaaagtttagaaaat
gttgaatctattgttaaaaaattgtcaactgaatcggaaaaactgaaagaatctcgagaa
agtttagaagaaaaggtcaggtttttgaaggaattgtgtatgtctgaagaatctggtaaa
agagatcttgaaaataatttagatcttttgaaaaaacaagaaaaaatggaagaattgaaa
aaagattacaatgaacttcaagatgaattggaagaattgaaatatgagcaacgcaagaaa
aagtataatgctttgtatgaagaaaaagaaattttggaaaaagagataagtactaaacaa
ggatctttaatagaattggataaaactatcaaggaaataaaaagatcactgaataaagag
gactatagaatggcacgaaaaaattataaagcgttgactttagaattacaagtacgagaa
gaagctattgcgaatttaaaaagtttcactcaggtcttggacggagccatgatcaaattt
cacgaggaacgaatggctactgttaatacaatgatgaaaaaactctggactcatgtttac
ggtggaaacgataccacatccattcaaattcgcgttcaaaaaaccgagggaatcggcgac
aagaagagatcttataattacaagttggtccaaattaagcactcgaaagaaatggacatg
aaaggaaagtgcagtgccggtcagaaagttttggcgtcgattatcattcgtatggccctg
gcggaaacgttttgcgctgaatgctctgtcttggcgttggacgaacccacaacaaatctt
gatgatgagaatgccacaaacttggccgtgacattatccaaagttattcaacatcgcgct
caacattccaaaaatttccagcttatagttattagtcacgatgaaaaattcatcggccat
ttgtcgaatttgagtggaaagcaaatgttccatgaactctaccgcaatatcgatggttac
agtcttgtacgtcgcagagatatgactgatttcagacaacattctcaaactcaagcgagt
gctacctacggaggtgaccccgatttcaccgaagacgaagaagatgacaatcaagagcca
aataccatcaaaaaagaaattatgataaattcagacgaagaggacatcaatgcaaaactc
atgagtaatagagctagagtcgcggcagcgccagccaaaaaagcacccgctcgacaacca
gttgctaagaaggcgcctgcaagaacgacggcagcggcgaaaaaacaacctgccaaaaca
atgcccacgagacaattggatatatcgtcgttcagaagaccatcaactcaatctcaagtg
cctacgcaaattagcgatgacgacgacgacgacgacgattcgccgccgagagcaggagtc
agtaggcaagttcgacgtcctactcaatgtttgcccgactccgaagagcagatgagtgcg
aagagcagcaaacaaataacgagaaaacgaagtgtaatcgacgattctccgccgagaaaa
accggcaaacaggtgaagaagcacgccctcgatttgctcgacgattctccacccaggtcg
accagacagtcgaaaaaacgcgaattcacgcgcttggatgattctccaccgacccagagg
caaactttggacgatctcgacgattctccgccaaaagctcaatcgagaaagcgtaatctc
gacctggattctccgccgagcagctcccacaagaagcgagctttcttctaa

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