Trichogramma pretiosum: 106660585
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Entry
106660585 CDS
T07644
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03440
Homologous recombination
tpre03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106660585
03450 Non-homologous end-joining
106660585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpre03032
]
106660585
03400 DNA repair and recombination proteins [BR:
tpre03400
]
106660585
DNA replication proteins [BR:
tpre03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
106660585
DNA repair and recombination proteins [BR:
tpre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
106660585
BRCA1-C complex
106660585
NHEJ (non-homologous end-joining)
MRX complex
106660585
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
SbcC_Walker_B
Rad50_zn_hook
AAA_29
AAA_21
AAA_16
AAA_13
ABC_tran
AAA_22
AAA_28
Motif
Other DBs
NCBI-GeneID:
106660585
NCBI-ProteinID:
XP_014239118
LinkDB
All DBs
Position
Unknown
AA seq
1556 aa
AA seq
DB search
MSKVKDLEIRGIRNFGDETSKNRIHFSTPLTLILGPNGTGKTTIIEALKYVTSGEYPPDS
ERGKAFVHEPKLTSTHSVRGQVKAKIIDKHGNEIIVVRTCQVSRIKSGTLKFQALDNTLK
RFNPKTQQEATITSRCADIDREMLNAMGVSKPILNYVIFCHQEESNWPLEDGKKLKERFD
EIFDTSKYNKAMEAATKLIKDSTGKLNTLREREKGLAKIVEEVKDKEEHLRNCQTREEEA
TQKIKDIEDKIKPIDEQMIDFLDVQKEHKKIEEKLRMVESNYKMSKNYIENLKQHIKHIH
KGTLEELISKIETFDTNLTQKKDEQNIYIEELETLDRNERKIKNKLDDARTQLGALKQKQ
IEYHEKVGKRNELLSKALDTWEITHDSEFSETEVTSNMNLIKNKLDEFKLSMKDKLKENE
QEERYLQSVVDESRAHKTGIESEISLKQKEKEEIKHEINECRKKIKETGEAGTKLSIFES
NLQTATQQYENLLKDFNEESLKEELQKYNKQRKEYDSRITLLDQEINSLHKLSSMQAELE
LHQNQLKDKEVEISALKKKHSNNLMVFFGSETVPEKQLKKHIEKIHSSLLKEKNELSKEI
DNKQQKLTSLITTQKHKDAELEKAISELNENEMKVSEKCDGQDYDEILLLQERKVKSLQD
QRGIYANQKLMYEEFLKKMKKKTCCPLCDRGLGSAEEKQLEQKMLAEIKKSPQSLKQCEA
ELKQEQAHYDALQQLKPVTEEINKMQRIKIPQMRSQLSKTKSEIQKLDSDLENLKILISE
PENKLEVYKSMYSDVTLLDNHLAELDKLNSLIDEKKDSMSKAGKIGDRSMQEVQNERQAL
KKRFSTVETKAEEIQSKIQIGQEKVQKAREQKNKLNEEIIRVKQDMQALNQIKAKVKDLY
TKETSLEESLKVLRSNFVKAEEDLSLKVDELSSLKKKNREEQDKDMNFKSTINTVYHELE
IVQEEVKKFIKNKVEESLENVESIVKKLSTESEKLKESRESLEEKVRFLKELCMSEESGK
RDLENNLDLLKKQEKMEELKKDYNELQDELEELKYEQRKKKYNALYEEKEILEKEISTKQ
GSLIELDKTIKEIKRSLNKEDYRMARKNYKALTLELQVREEAIANLKSFTQVLDGAMIKF
HEERMATVNTMMKKLWTHVYGGNDTTSIQIRVQKTEGIGDKKRSYNYKLVQIKHSKEMDM
KGKCSAGQKVLASIIIRMALAETFCAECSVLALDEPTTNLDDENATNLAVTLSKVIQHRA
QHSKNFQLIVISHDEKFIGHLSNLSGKQMFHELYRNIDGYSLVRRRDMTDFRQHSQTQAS
ATYGGDPDFTEDEEDDNQEPNTIKKEIMINSDEEDINAKLMSNRARVAAAPAKKAPARQP
VAKKAPARTTAAAKKQPAKTMPTRQLDISSFRRPSTQSQVPTQISDDDDDDDDSPPRAGV
SRQVRRPTQCLPDSEEQMSAKSSKQITRKRSVIDDSPPRKTGKQVKKHALDLLDDSPPRS
TRQSKKREFTRLDDSPPTQRQTLDDLDDSPPKAQSRKRNLDLDSPPSSSHKKRAFF
NT seq
4671 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagtcaaggacctcgagattcgaggcatcagaaatttcggcgatgagacgtcg
aaaaatcgcatccacttctcgacgccgctcaccctgatcctcggcccgaacggcaccggc
aaaacgaccatcatcgaggccctcaagtatgtcacctccggggaatatccgccggactcg
gaacgcggcaaggccttcgttcacgagcccaagctgacctcgactcactcggtacgcggt
caagttaaagccaaaatcattgacaagcatggcaatgaaataattgttgtcaggacgtgt
caagtgtcaagaataaaaagtggcaccttaaaatttcaagcgctggacaacacattaaaa
cggttcaatccaaaaactcaacaggaagctactataactagcagatgcgcagatatcgac
agagaaatgctgaatgctatgggtgtttccaaaccaatcctcaactatgtcatattttgc
catcaggaagaatcaaattggccactcgaagatggtaaaaaattgaaggagagattcgat
gaaatttttgatacttctaaatacaataaggcaatggaagctgctacaaaattaattaag
gattcaactggcaagctaaatacattgagagaaagagaaaagggtttagctaaaattgtt
gaagaagtcaaagataaagaagaacatttgagaaattgtcaaacgagagaggaagaggca
acgcaaaaaataaaagatattgaagacaaaatcaaacctatcgatgagcaaatgattgat
tttcttgatgttcaaaaagaacataaaaaaatagaagaaaaattaagaatggttgaaagt
aattacaaaatgtccaaaaattatattgagaacttaaaacaacatattaaacatatacat
aaaggaaccctagaggaattaatttcaaaaattgaaacgtttgatacaaatcttactcag
aaaaaggatgaacagaacatatatattgaggaacttgaaactttggatcgaaatgaacgc
aaaataaaaaataagcttgatgatgctagaactcaattaggtgccttaaaacaaaagcaa
atagaatatcatgaaaaagttggtaaaagaaatgaattgttatccaaagctctggatact
tgggaaataacacatgattcagaattctctgaaacagaggtaacaagtaatatgaatctt
ataaaaaacaaattggatgaattcaaattatccatgaaggataaacttaaagaaaatgaa
caagaagagagatatttgcaaagtgtagttgatgagtcaagagctcataaaacaggaatt
gagtctgaaatatcattaaagcagaaagaaaaagaagaaattaaacacgaaatcaatgaa
tgtagaaaaaagattaaagagacaggtgaagctgggactaaattaagtatatttgagtct
aatttgcaaactgccacacagcagtatgagaatttgttaaaagatttcaatgaggaatct
ttaaaagaagagttacaaaagtacaacaaacaaagaaaagaatatgacagtcgcattaca
ctattagatcaagaaattaattctttacataaattaagttcaatgcaagcagaattggaa
ttacatcagaatcaattgaaagataaggaagttgaaatttcagctctgaaaaaaaaacat
tccaataacctgatggtattttttggatctgaaacagttccagaaaaacaattaaaaaag
cacattgaaaaaatacattcttctttgttaaaagaaaaaaatgaattatcaaaagagatt
gataataaacagcaaaaactgacaagtttaattactacacaaaagcataaagatgctgaa
ttggaaaaggccatttctgaactcaacgaaaatgagatgaaagtttcagaaaagtgtgat
ggacaagattatgatgaaattttattacttcaagaaagaaaagtaaaatctcttcaagac
caaagaggcatttacgcaaatcaaaaattaatgtatgaagaatttttgaagaaaatgaag
aaaaaaacatgttgtccactgtgtgatagagggttgggcagtgcagaagaaaaacaattg
gaacaaaaaatgcttgcagaaatcaaaaaaagtcctcagagcttgaagcaatgtgaagct
gaattaaaacaagaacaagctcattatgatgctttacaacaactcaaaccagtaacggaa
gaaattaataaaatgcaaagaattaaaattccacaaatgagatctcaattaagtaaaaca
aagagcgaaattcagaaattagactcagatcttgaaaatttgaaaattttgatatcagaa
ccagaaaataaactagaggtctataaaagcatgtacagtgatgtaacattattagataat
catcttgctgaactggataaattaaacagtcttattgatgaaaaaaaagattcaatgtca
aaagcaggtaaaattggtgatagaagtatgcaagaagttcagaacgagcgtcaagcttta
aagaaaaggtttagcactgtggaaacaaaagctgaggaaatccagtccaaaatacaaatt
ggtcaagagaaagttcaaaaggctagggagcaaaaaaataagctcaatgaagaaatcatc
agagtaaaacaagatatgcaagcgctcaatcaaataaaagcaaaagttaaagatttatac
actaaagaaacatctcttgaagaatctttaaaagtgttgcgatcaaattttgtcaaagct
gaagaagatttgtcactgaaagttgatgaattatctagtttaaagaaaaaaaatcgggaa
gagcaagataaagatatgaattttaaatcaacaatcaacacggtttatcacgagttagaa
attgttcaagaagaagtaaaaaaatttataaaaaacaaagtagaagaaagtttagaaaat
gttgaatctattgttaaaaaattgtcaactgaatcggaaaaactgaaagaatctcgagaa
agtttagaagaaaaggtcaggtttttgaaggaattgtgtatgtctgaagaatctggtaaa
agagatcttgaaaataatttagatcttttgaaaaaacaagaaaaaatggaagaattgaaa
aaagattacaatgaacttcaagatgaattggaagaattgaaatatgagcaacgcaagaaa
aagtataatgctttgtatgaagaaaaagaaattttggaaaaagagataagtactaaacaa
ggatctttaatagaattggataaaactatcaaggaaataaaaagatcactgaataaagag
gactatagaatggcacgaaaaaattataaagcgttgactttagaattacaagtacgagaa
gaagctattgcgaatttaaaaagtttcactcaggtcttggacggagccatgatcaaattt
cacgaggaacgaatggctactgttaatacaatgatgaaaaaactctggactcatgtttac
ggtggaaacgataccacatccattcaaattcgcgttcaaaaaaccgagggaatcggcgac
aagaagagatcttataattacaagttggtccaaattaagcactcgaaagaaatggacatg
aaaggaaagtgcagtgccggtcagaaagttttggcgtcgattatcattcgtatggccctg
gcggaaacgttttgcgctgaatgctctgtcttggcgttggacgaacccacaacaaatctt
gatgatgagaatgccacaaacttggccgtgacattatccaaagttattcaacatcgcgct
caacattccaaaaatttccagcttatagttattagtcacgatgaaaaattcatcggccat
ttgtcgaatttgagtggaaagcaaatgttccatgaactctaccgcaatatcgatggttac
agtcttgtacgtcgcagagatatgactgatttcagacaacattctcaaactcaagcgagt
gctacctacggaggtgaccccgatttcaccgaagacgaagaagatgacaatcaagagcca
aataccatcaaaaaagaaattatgataaattcagacgaagaggacatcaatgcaaaactc
atgagtaatagagctagagtcgcggcagcgccagccaaaaaagcacccgctcgacaacca
gttgctaagaaggcgcctgcaagaacgacggcagcggcgaaaaaacaacctgccaaaaca
atgcccacgagacaattggatatatcgtcgttcagaagaccatcaactcaatctcaagtg
cctacgcaaattagcgatgacgacgacgacgacgacgattcgccgccgagagcaggagtc
agtaggcaagttcgacgtcctactcaatgtttgcccgactccgaagagcagatgagtgcg
aagagcagcaaacaaataacgagaaaacgaagtgtaatcgacgattctccgccgagaaaa
accggcaaacaggtgaagaagcacgccctcgatttgctcgacgattctccacccaggtcg
accagacagtcgaaaaaacgcgaattcacgcgcttggatgattctccaccgacccagagg
caaactttggacgatctcgacgattctccgccaaaagctcaatcgagaaagcgtaatctc
gacctggattctccgccgagcagctcccacaagaagcgagctttcttctaa
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integrated database retrieval system