KEGG   Thermococcus profundus: A3L09_03045
Entry
A3L09_03045       CDS       T05153                                 
Name
(GenBank) RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
tprf  Thermococcus profundus
Pathway
tprf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tprf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A3L09_03045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tprf03019]
    A3L09_03045
   03009 Ribosome biogenesis [BR:tprf03009]
    A3L09_03045
Enzymes [BR:tprf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     A3L09_03045
Messenger RNA biogenesis [BR:tprf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     A3L09_03045
Ribosome biogenesis [BR:tprf03009]
 Prokaryotic type
  rRNA helicases
   A3L09_03045
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2 UvrA_inter
Other DBs
NCBI-ProteinID: ASJ02305
UniProt: A0A2Z2MCK5
LinkDB
Position
complement(544502..545686)
AA seq 394 aa
MSFEKLGLSEATLVAVRQKGFERPTDIQREVIPLLLSGEKDIIGQSQTGTGKTAAFALPI
IEAIDPKEKNVQAIILTPTRELALQVADEIKSLRGRKRVYVYAVYGGQPIGPQIRALERG
THVVVGTPGRVLDHIRRGTIDLSGVKFFILDEADRMLDMGFIDDIESIMRNTPEEKRILM
FSATMPREILLLAKRYMRNPEVVIVSRDELVPEMVDQEYVEVLPARRYRKLREVLTEDFY
GIIFCQTKRETRELSERLRRDGYSAEALNGDMNQAARERTFKRFKERRTRILVATDVAAR
GLDVRDISHVVNYSIPMNPEQYIHRIGRTGRMGKRGRAITFLQPGELRKFRYIAKDAGVE
VRRSSLSEKTPKEFRNEELESEYRRRWGGRRRRF
NT seq 1185 nt   +upstreamnt  +downstreamnt
atgagttttgaaaagttaggtttatccgaggccaccctagtggccgtcaggcaaaagggt
tttgaaagaccaacggacattcagagggaggtcatacccctgcttctctcgggcgagaag
gatataatcggccagtcccagaccgggaccgggaagacagctgcttttgcgcttccgata
atagaggcgatagaccccaaggagaaaaacgttcaggcgataatcctcacgcccaccagg
gagctcgccctccaagtggcggatgaaatcaaaagcctccgcgggaggaagagggtctac
gtttacgctgtctacggcggccagccgatagggccccagataagggcgcttgagagggga
acgcacgtcgtcgtcggaactccaggaagggttctcgaccacataaggcgcggcaccatc
gacctgagcggggtcaagttcttcatcctcgacgaggccgacaggatgctcgacatgggg
ttcatcgatgacatagagagcataatgaggaacacccccgaggaaaagcgcatcctgatg
ttctcagctactatgccgagggagatcctcctcctggcgaagaggtacatgaggaacccc
gaggtcgtgatagtcagcagagacgagcttgttccagagatggtcgaccaagagtacgtg
gaagtccttccggcgaggaggtacagaaagctcagggaagttctcaccgaggatttctac
ggcataatcttctgccagaccaaaagggaaacccgtgagctgagcgagaggctcaggaga
gacggctacagtgcagaagctctcaacggggacatgaaccaggcagcccgcgaaagaacc
ttcaagaggttcaaagaaaggaggaccaggatactcgtcgcgacggacgtcgcggccagg
ggtctggacgttcgggacataagccacgtcgtaaactactccatcccaatgaacccggag
cagtacatccaccgcattgggagaacgggaagaatgggtaagaggggaagagccataaca
ttcctccagccgggcgagctcaggaagttcaggtacatagccaaggacgctggggtggag
gtgaggaggtcatccctcagcgagaaaacccccaaagagttcagaaacgaggaactggag
agcgagtaccgaagaaggtggggaggaaggaggagaaggttttag

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