Thermococcus profundus: A3L09_04215
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Entry
A3L09_04215 CDS
T05153
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
tprf
Thermococcus profundus
Pathway
tprf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tprf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
A3L09_04215 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tprf03021
]
A3L09_04215 (tfb)
Transcription machinery [BR:
tprf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
A3L09_04215 (tfb)
Prokaryotic type
Archaeal type
TFB
A3L09_04215 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
BRF2-like_C_cyclin_rpt
Sigma70_r4
HTH_Tnp_ISL3
RB_B
FYDLN_acid
RUBY_RBDX
UPF0253
Zn_ribbon_RRN7
Zn_Ribbon_Prim
Zn_ribbon_tTFIIB
Ribosomal_S27e
Zn_ribbon_IS1595
FtrD-like
Lar_restr_allev
ADK_lid
Zn_ribbon_LysW
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
ASJ02513
UniProt:
A0A2Z2MAN7
LinkDB
All DBs
Position
744774..745676
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AA seq
300 aa
AA seq
DB search
MSKKRVCPVCGSTEFIYDPSRGEVVCKVCGYVIEENVVDMGPEWRAFDASQREKRARAGA
PESILLHDKGLSTDIGIDRSLTGLMREKMYRLRKWQSRLRVSDAAERNLAFALSELDRLA
SNLRLPRHVEEEAARLYREAVRKGLIRGRSIESVIAACVYAACRLLKIPRTLDEIAEVSR
VDKKEIGRSFRFIARHLNLTPKKLFVKPTDYVSKFADELGLSEKVRKKAIELLEEAYSRG
LTSGKSPAGLVAAALYIAGLMEGEKRTQREVAEVARVTEVTVRNRYKELIEKLNLKVPMG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaagaagagggtctgtcctgtttgcggctccacggagttcatctacgatccaagc
aggggagaggtcgtctgtaaggtttgcggttacgttattgaggagaacgtcgttgatatg
gggcccgagtggagggcctttgatgcgagccagagggagaagagggcacgcgcgggcgcc
ccagagagcatactccttcacgataagggcctctccacggatataggaatagaccgttcc
cttaccggcttgatgagggagaagatgtaccgcctgaggaagtggcagagccgcctgagg
gtcagcgacgccgccgagagaaacctggccttcgccctgagcgagctggacaggctggcc
agcaacctgcgccttccgaggcacgttgaggaggaggccgcccgtttgtaccgtgaggcc
gttagaaagggcctgataaggggccgctccattgagagcgtcatagcggcctgtgtctac
gccgcctgcaggcttctcaagatcccccgaacccttgatgaaatagctgaagtttctcgc
gtcgacaaaaaggagataggcagaagctttcgcttcatagcgagacacctcaacctcacc
ccaaagaagctcttcgttaagccgacagattacgtcagcaagtttgcagatgagctggga
ttaagtgagaaggttagaaagaaggccatagagctccttgaggaggcatactcccggggt
ttaaccagcgggaagagcccggccggcctcgttgcggcggcgctctacatagccggcctc
atggagggggaaaagagaacccagagggaagtggccgaggtggcgagggtcacggaggtc
acagtcaggaacaggtacaaggagctcatagaaaaactaaacctgaaggtgccgatgggc
tga
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