KEGG   Thermococcus profundus: A3L09_04725
Entry
A3L09_04725       CDS       T05153                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
tprf  Thermococcus profundus
Pathway
tprf03030  DNA replication
tprf03410  Base excision repair
tprf03420  Nucleotide excision repair
tprf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tprf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A3L09_04725
   03410 Base excision repair
    A3L09_04725
   03420 Nucleotide excision repair
    A3L09_04725
   03430 Mismatch repair
    A3L09_04725
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tprf03032]
    A3L09_04725
   03400 DNA repair and recombination proteins [BR:tprf03400]
    A3L09_04725
DNA replication proteins [BR:tprf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    A3L09_04725
DNA repair and recombination proteins [BR:tprf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     A3L09_04725
   MMR (mismatch excision repair)
    Other MMR factors
     A3L09_04725
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    A3L09_04725
SSDB
Motif
Pfam: PCNA_N Rad1 PCNA_C Hus1 Rad9
Other DBs
NCBI-ProteinID: ASJ02611
UniProt: A0A2Z2MJK0
LinkDB
Position
848912..849661
AA seq 249 aa
MAFEIVFDGAKEFADLIATASNLIDEAAFKVTEEGISMRAMDPSRVVLIDLNLPESIFSK
YEVEEEETIGVNIDHFKKILKRGKGKDTLILRKGDENFLEVTFEGTAKRTFRLPLIDVEE
LELDLPELPFTAKVVLLGEVLKEAVKDASLVSDAMKFIAKENEFTMKAEGETNEVEIKLT
LEDEGLLDLEVDEETKSAYGISYLADMVKGIGKADEVTIRFGNEMPLQMDYFIRDEGKLT
FLLAPRVED
NT seq 750 nt   +upstreamnt  +downstreamnt
atggcgtttgagatcgtttttgatggggcaaaggagttcgcggatctcatagcgaccgca
agcaacctgatagacgaggccgcatttaaggtcacggaagagggcataagcatgcgcgcc
atggatcccagcagggttgttctcatagacctgaaccttccggagagcatattctccaag
tacgaggtcgaggaagaggagacaatcggggttaacatagaccacttcaagaagatactc
aagcgcggaaagggcaaggacaccctcatcctcaggaagggcgacgagaacttccttgag
gtgacctttgagggcactgccaagaggactttccgccttccgctgatcgatgtggaggag
ctggagctcgaccttccggagctcccgttcactgccaaggtggttctcctcggggaggtt
ctgaaggaggccgttaaagacgcctctctagtcagcgacgccatgaagttcatagccaag
gagaacgagttcacaatgaaggccgagggtgagaccaacgaggtcgagataaagctcacc
ctcgaggacgagggccttcttgaccttgaggtcgatgaggagaccaagagcgcctacgga
ataagttacctcgcagacatggtgaagggcatcggcaaggccgacgaggtgacgatccgc
ttcggcaacgagatgccgctccagatggactacttcatccgcgacgagggcaagctgacg
ttcctcctcgctcccagggttgaggactga

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