Thermococcus profundus: A3L09_09965
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Entry
A3L09_09965 CDS
T05153
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
tprf
Thermococcus profundus
Pathway
tprf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tprf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
A3L09_09965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tprf03000
]
A3L09_09965
03021 Transcription machinery [BR:
tprf03021
]
A3L09_09965
Transcription factors [BR:
tprf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
A3L09_09965
Transcription machinery [BR:
tprf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
A3L09_09965
RNA polymerase III system
TFIIIB
A3L09_09965
RNA polymerase I system
SL1/TIF-1B
A3L09_09965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
AIRS_C
UMPH-1
Motif
Other DBs
NCBI-ProteinID:
ASJ03556
UniProt:
A0A2Z2MCI0
LinkDB
All DBs
Position
1877261..1877836
Genome browser
AA seq
191 aa
AA seq
DB search
MVDMSNVKLRIENIVASVDLFAQLNLEKVIEICPNSKYNPEEFPGIICRFEVPKVALLIF
SSGKLVVTGAKSVDDIKNAVNKLTEMLRTKVGTQFTKPPQIDIQNMVFSGDIGVEFNLDA
VALSLPNCEYEPEQFPGVIYRVKDPKAVILLFSSGKIVCSGAKSENDAWEAVKKLLRELE
KYGLVEEEEEW
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
ttggtagacatgagcaatgttaagctcaggattgaaaatatagtcgcttctgttgacctc
tttgcacagctcaacctggagaaggttatagaaatctgcccgaactccaagtacaatcca
gaggagttcccggggatcatctgccgctttgaggtaccgaaggttgccctccttatattc
agctcaggaaagctcgtagttaccggcgcaaagagcgtcgacgacataaagaatgcggtt
aacaaactcacagagatgctcagaacaaaggtcggcacccagttcaccaagccgccccag
atagacattcagaatatggtcttcagcggggacattggggtggagttcaacctcgatgca
gttgcattaagccttccaaactgtgagtacgagcccgagcagttcccgggcgtcatctac
cgtgttaaggatccaaaggcagtgatactgctgttctcctcgggtaagatagtctgctcg
ggagctaagagcgagaacgatgcatgggaggccgtgaagaagctcctccgcgagctggag
aagtacggcctcgtggaagaagaggaagagtggtga
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