Salipiger profundus: Ga0080559_TMP1163
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Entry
Ga0080559_TMP1163 CDS
T04656
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
tpro
Salipiger profundus
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpro03032
]
Ga0080559_TMP1163
03036 Chromosome and associated proteins [BR:
tpro03036
]
Ga0080559_TMP1163
03400 DNA repair and recombination proteins [BR:
tpro03400
]
Ga0080559_TMP1163
DNA replication proteins [BR:
tpro03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Ga0080559_TMP1163
Chromosome and associated proteins [BR:
tpro03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Ga0080559_TMP1163
DNA repair and recombination proteins [BR:
tpro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Ga0080559_TMP1163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
APX21959
UniProt:
A0A1U7D1D8
LinkDB
All DBs
Position
complement(643860..644147)
Genome browser
AA seq
95 aa
AA seq
DB search
MAKPMTKTQLVAALAEEMGADKKTATTALDAITGIITKEVAAGGAVTLPGVGKIYCRERP
ERMVRNPATGEQFKKEADKQVKMTIAKALKDSVNE
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaccgatgaccaagacccagctggtggccgcactggccgaggagatgggcgca
gacaagaaaaccgccaccaccgcgctggacgcgatcaccggcatcatcaccaaggaagtg
gccgccggcggcgccgtgaccctgccgggcgtgggcaagatctactgccgcgagcgcccc
gagcgcatggtccgcaaccccgcgaccggcgagcagttcaagaaagaggccgacaagcag
gtcaagatgaccattgcgaaggccctcaaggacagcgtcaacgagtga
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