Salipiger profundus: Ga0080559_TMP1179
Help
Entry
Ga0080559_TMP1179 CDS
T04656
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tpro
Salipiger profundus
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpro03016
]
Ga0080559_TMP1179
Enzymes [BR:
tpro01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Ga0080559_TMP1179
Transfer RNA biogenesis [BR:
tpro03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Ga0080559_TMP1179
Prokaryotic type
Ga0080559_TMP1179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
APX21975
UniProt:
A0A1U7D1L5
LinkDB
All DBs
Position
660043..660957
Genome browser
AA seq
304 aa
AA seq
DB search
MARKKGRDISGWLIVDKPAGMTSTSVVNKVRWALAAKKAGHAGTLDPDATGVLAVALGEA
TKTVPFVTDALKAYRFTVRLGQRTNTDDAEGEVIASSDARPSDDEIKEALHRFVGEIEQI
PPQFSAVKIDGERAYKRARDGETMEIAARPLWVEELVMTGRPDSDHVELEMTCGKGGYVR
SIARDLGEALGCHGHVRELRRIWSGPFEAEDGIGIEQIDALAKTPELDEKLLPLEVGLAD
LPELKCTPEGAAKLRNGNPGMVIPGDVDYGDEAWASLDGRAVAVGVFKAGELHPTRVFVQ
PVSG
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaagaagggccgcgacatttccggctggctgatcgtcgacaaaccggcgggc
atgacctcgacgtcggtggtcaacaaggtgcgctgggcactcgccgcaaagaaggcggga
cacgcgggcacgctcgacccggacgcgacgggcgtgctggccgtggcgctgggcgaggcc
accaagacggtgcccttcgtcaccgatgcgctcaaggcgtatcggttcaccgtgcgcctc
gggcagcggaccaacaccgacgacgccgagggcgaggtgatcgcttcctccgacgcgcgt
ccctcggatgacgagatcaaggaagccctgcaccgcttcgtcggcgagatcgagcagatc
ccgccgcagttctcggcggtgaagatcgacggcgagcgggcctacaagcgcgcccgcgat
ggcgagacgatggagatcgcggcccgcccgctctgggtcgaggaactggtgatgaccggt
cgtcccgattccgatcacgtcgaactcgagatgacctgcggcaagggcggctacgtgcgc
tccatcgcgcgcgatctcggcgaggcgctcggctgccacggccacgtgcgcgagctgcgc
cgcatctggtcgggcccgttcgaggccgaggacggcatcggcatcgagcagatcgacgcg
ctggccaagacccccgagctcgacgaaaagctgctgccgctcgaggtcgggctcgccgac
ctgccggaactgaaatgcacgcccgagggcgcggcaaagctgcgcaacggcaatcccgga
atggtcatccccggcgacgtggattacggcgacgaggcctgggcctcgctcgacggccgc
gccgtggcggtgggcgtcttcaaggccggcgagcttcacccgacgcgggtcttcgtacag
ccggtctccggctga
DBGET
integrated database retrieval system
