Salipiger profundus: Ga0080559_TMP1308
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Entry
Ga0080559_TMP1308 CDS
T04656
Name
(GenBank) DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tpro
Salipiger profundus
Pathway
tpro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ga0080559_TMP1308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpro03400
]
Ga0080559_TMP1308
Enzymes [BR:
tpro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Ga0080559_TMP1308
DNA repair and recombination proteins [BR:
tpro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Ga0080559_TMP1308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
HTH_15
Motif
Other DBs
NCBI-ProteinID:
APX22104
UniProt:
A0A1U7D1R6
LinkDB
All DBs
Position
complement(800665..801456)
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AA seq
263 aa
AA seq
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MDWHWARAALDWQLEMGADETMGELPVDRFAAEAEAQAARAAARATPAAAAGGRAPMPGP
VPLDTGPDPVEVAQQAAAQATTLDALREAMAAFEHCELKRGARNLVFCDGTADARVMIVG
EAPGRDEDRQGKPFVGRAGQLLDRMLAPVGLSRDRNVYITNVLPWRPPQNRDPKPDEIAM
MKPFLAKHIALVDPELLVIMGNISCDALLGRRGITRLRGKWAEAEGRPALPMFHPAYLLR
QPQMKREAWADVLELAAKLKAGG
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggactggcactgggcgcgcgcggcgctggactggcagctcgagatgggcgccgacgag
acgatgggcgaactgccggtcgaccgcttcgccgccgaggccgaggcgcaggcggcccgt
gccgccgcgcgtgccacccccgccgccgccgctggcggacgtgcgccgatgccgggcccc
gtgccgctggacaccggacccgacccggtcgaggtcgcgcagcaggccgccgcacaggcc
accacgctcgatgccctgcgcgaggccatggccgccttcgagcactgcgaactgaagcgc
ggggcgcggaacctcgtgttctgcgacggcaccgccgatgcgcgggtgatgatcgtgggc
gaggcgccggggcgcgacgaggaccgtcagggcaagcccttcgtcgggcgcgccgggcag
cttctcgaccggatgctcgcgccggtgggcctttcgcgcgatcgcaacgtctacatcacc
aacgtgctgccgtggcggccgccgcagaaccgcgacccgaagcccgacgagatcgcgatg
atgaagccgttcctggccaagcatatcgcgctggtcgatcccgagctgctggtgatcatg
ggcaacatctcctgcgatgcgctgctggggcggcgcggcatcacccggctgcgcggcaag
tgggccgaggccgagggccgtccggcgctgccgatgttccatcccgcctacctgctgcgc
cagccgcagatgaagcgcgaggcctgggccgacgtgctcgagcttgccgcgaagctgaag
gcaggcgggtga
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