Salipiger profundus: Ga0080559_TMP1335
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Entry
Ga0080559_TMP1335 CDS
T04656
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tpro
Salipiger profundus
Pathway
tpro03030
DNA replication
tpro03410
Base excision repair
tpro03420
Nucleotide excision repair
tpro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ga0080559_TMP1335
03410 Base excision repair
Ga0080559_TMP1335
03420 Nucleotide excision repair
Ga0080559_TMP1335
03440 Homologous recombination
Ga0080559_TMP1335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpro03032
]
Ga0080559_TMP1335
03400 DNA repair and recombination proteins [BR:
tpro03400
]
Ga0080559_TMP1335
Enzymes [BR:
tpro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ga0080559_TMP1335
DNA replication proteins [BR:
tpro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Ga0080559_TMP1335
DNA repair and recombination proteins [BR:
tpro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Ga0080559_TMP1335
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ga0080559_TMP1335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
APX22131
UniProt:
A0A1U7D1W0
LinkDB
All DBs
Position
825769..828576
Genome browser
AA seq
935 aa
AA seq
DB search
MTQFGKGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVSGFCNMLQKYVEDNAGPDA
PTHVAVIFDKGSHTFRNDLYDQYKANREEMPEDLRPQIPLTREATIAFNIACKELEGYEA
DDIIATLSRQAREAGGRVTIISSDKDLMQLVGDGVEMLDAMKNRRIDRDGVMEKFGVWPD
RVVDVQALAGDSVDNVPGAPGIGIKTAALLINEWGSLEELLDNAEQIKQPKRRQTLIDKR
EQIELSKRLVQLDEETPLDFTLDDLEVREPDPETLLEFLTKMEFRSLTKRISDSLGVEAP
VLPDTTPEGANPPEDDAPEMPAIDPESYVWVKTAEDLAPWIAAAHERGWVAVDTETTGLD
EMACDLVGISLCIEPGEACYIPLAHRGDSDGGLFGDGDLAEGQMPMQAALDALKPLFEDP
AVMKIGQNMKYDAKVFSRYGIDISPIDDTMLMSYAMNAGLHTHGMDALSERYLSHVPIPI
KTLLGSGKKMKTFDQVPIGDAVKYAAEDADITLRLWKIFKPQLHRAHVTRVYEGLERPLV
PVLAEMERNGVQVDRNVLSRMSGAFAQKMAQLEEEIHELAGESFNVGSPKQLGEILFDKM
GLEGGKKGKTGAYGTGADVLEDLATEHELPARVLDWRQISKLKSTYTDALQGHINAETGR
VHTSYVIAGANTGRLASTDPNLQNIPVRSEEGRRIREAFVAPEGKTLVSLDYSQIELRIL
AHMADIDALKQAFRDGQDIHAMTASEMFNVPMDEMTPEIRRQAKAINFGVIYGISGFGLA
RNLRIPRKDAQDFIDRYFERFPGIKAYMDDTTEFAKEHKRVETLFGRVIHTPEIAAKGPR
AGFAKRAAINAPIQGTAADIIRRAMIRMPEAIEGLPAKMLLQVHDELLFEVETGAEDALI
EAARAVMEGAAEPVVKLDVPLVADAGQGSNWAEAH
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgacccagttcggcaagggctgccacctgcacctgatcgacggatcggccttcatcttc
cgagcctatcacgcccttccgccgctgacgcggaagtcggacgggctgcccatcggcgcc
gtctcgggcttctgcaacatgttgcagaaatacgtcgaggacaacgccggccccgatgca
ccgacgcatgtcgcggtgatcttcgacaagggctcgcacactttccgcaacgacctctac
gaccagtacaaggccaaccgcgaggagatgcccgaggatctgcgcccgcagatcccgctg
acccgcgaggccaccatcgcgttcaacatcgcctgcaaggagctcgagggctacgaggcc
gacgacatcatcgccaccctgtcgcggcaggcgcgcgaggccggcgggcgggtgacgatc
atcagctcggacaaggacctgatgcagctcgtcggcgacggggtcgagatgctcgacgcg
atgaagaaccgccgcatcgaccgcgacggggtgatggagaagttcggcgtctggcccgac
cgcgtggtcgacgtgcaggcgctcgccggcgactcggtcgacaacgtgcccggcgcgccc
ggcatcggcatcaagaccgccgcgctgctcatcaacgagtggggctcgctcgaggagctg
ctcgacaacgccgagcagatcaagcagcccaagcgccggcagacgctgatcgacaaacgc
gagcagatcgagctgtcgaaaaggctcgtccagctcgacgaggagacgccgctcgacttc
acgctcgacgatctcgaggtgcgggagcccgatcccgagacgctgctggagttcctcacc
aagatggaattccgttcgctgaccaagcggatctcggactcgctgggcgtcgaggcgccg
gtcctgcccgacaccacgcccgaaggcgccaacccgcccgaggacgacgcgcccgagatg
cccgccatcgaccccgagagctacgtctgggtgaagacggccgaggatctcgcgccgtgg
atcgccgccgcgcacgaacgcggctgggttgccgtcgacaccgagaccacgggcctcgac
gagatggcctgcgacctcgtggggatctcgctctgcatcgagccgggcgaggcctgctac
atcccgctcgcccaccgcggcgacagcgacggcgggcttttcggcgacggcgaccttgcc
gagggtcagatgccgatgcaggcggcgctcgacgcgctgaagccgctgttcgaggacccg
gcggtgatgaagatcgggcagaacatgaaatacgatgccaaggtgttctcgcgctacggc
atcgacatctcgccgatcgacgacaccatgctcatgtcctacgcgatgaacgcggggctg
cacacgcacggcatggacgcgctctcggaacgctatctttcgcatgtgccgatcccgatc
aagacgctgctgggcagcggcaagaagatgaagacctttgaccaggtgccgatcggggac
gcggtgaaatacgccgccgaggacgccgacatcaccctgcggctgtggaagatcttcaag
ccgcagctgcaccgggcccatgtcacccgcgtctacgaggggctcgagcggccactggtg
ccggtgctggccgagatggagcgcaacggcgtgcaggtcgaccggaacgtgctgtcgcgc
atgtccggcgcctttgcccagaagatggcgcagctcgaggaagagatccacgagcttgcc
ggtgaaagcttcaacgtcggctcgccgaaacagctgggcgagatcctcttcgacaagatg
gggctcgaaggcggcaagaagggcaagaccggcgcctatggcaccggcgccgacgtgctc
gaggacctggcgaccgagcacgagctgcccgcgcgggtgctcgactggcggcagatctcg
aagctcaagagcacctacaccgacgcgctgcagggccatatcaacgccgagaccggccgg
gtgcacacctcctacgtgatcgcgggggcgaacaccggccggctggcctcgaccgatccg
aacctgcagaacatccccgtgcgctcggaggaaggccgccgcatccgcgaggccttcgtc
gcgcccgagggcaagacgctggtatcgctcgactacagccagatcgagctgcgcatcctc
gcccacatggccgacatcgacgccctgaagcaggcgttccgcgacggccaggacattcac
gcgatgaccgcgtcggagatgttcaacgtgccgatggacgagatgacgcccgagatccgg
cggcaggccaaggccatcaacttcggcgtgatctacggcatctcgggcttcgggctggcg
cgcaacctgcgcattccgcgcaaggacgcgcaggatttcatcgaccgctacttcgagcgg
ttcccgggcatcaaggcctacatggacgacaccaccgagttcgccaaggaacacaagcgg
gtcgagaccctgttcggccgggtgatccacacgcccgagatcgccgccaagggcccgcgc
gccggcttcgccaagcgcgccgcgatcaacgcgccgatccagggcaccgcggccgacatc
atccgccgcgcgatgatccggatgcccgaggcaatcgagggcctgcccgcgaagatgctg
ctgcaggtccacgacgaactgctgttcgaggtcgagaccggcgccgaggacgcgctgatc
gaggccgcccgcgctgtcatggagggcgcggcggaaccggtcgtgaagctcgacgtgccg
ctcgtcgcggatgcgggtcagggcagcaactgggccgaggcgcactga
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