Salipiger profundus: Ga0080559_TMP1542
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Entry
Ga0080559_TMP1542 CDS
T04656
Name
(GenBank) SSU ribosomal protein S6P modification protein
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
tpro
Salipiger profundus
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpro03009
]
Ga0080559_TMP1542
Ribosome biogenesis [BR:
tpro03009
]
Prokaryotic type
ribosomal protein modification factors
Ga0080559_TMP1542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
Zn_protease
GSH-S_ATP
ATP-grasp_3
R2K_3
ATPgrasp_ST
ATPgrasp_Ter
LysX_preATP_grasp
ATP-grasp
GARS_A
Motif
Other DBs
NCBI-ProteinID:
APX22338
UniProt:
A0A1U7D2K8
LinkDB
All DBs
Position
1045346..1046743
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AA seq
465 aa
AA seq
DB search
MSRFTLGWEEWLALPDLGLPAICAKVDTGARTSALHAFAIEPFGSSDKPMVRFAIHPDPT
DPALEMICSAPLKDRREVTSSNGETELRFVIETTITMGDRSWPIEVTLTDRGGMAYRMLL
GRTALAEDMIVQPSHSFCQPELSFEEYRGIPRNARHRRALRLAILTREPGNYSTRRLIES
AEARGHTMEAIDTSRCYMNIHAVGGEVHYDGRRLPHYDAVIPRIGASVTSYGTAVVRQFE
TMGTYCLSGSEGITTSRDKLHAHQVLARNRIGTPTTAFARSPKDSGNVISLVGGAPLVLK
LLESTQGKGVVLAETKKAAESVISAFQGLKADFLVQSFVKEAAGEDIRCFVVGGKVVAAM
RRKGKPDDFRSNLHQGGTAETVRITRTEREAAIRAARAMKLDVAGVDLLRGEDGPKVLEV
NSSPGLEGIEKTSGKDIAGLVIAHIEDKVAPRPPRPRSRTKRSAR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtttcacgctcggatgggaggaatggcttgccctccccgacctcggcctgccc
gcgatctgtgccaaggtcgataccggggcgcggacctccgcgctgcacgccttcgccatc
gaacccttcggctcctccgacaagccgatggtgcgcttcgcgattcatcccgatccgacc
gaccccgctctcgaaatgatctgctcggcgccgctcaaggaccggcgcgaagtcacctcg
tcgaacggcgagaccgagctacgcttcgtgatcgaaacgaccatcaccatgggcgaccgc
agctggccgatcgaggtcacgctgaccgaccgcggcggcatggcctaccggatgctgctc
ggccgcaccgcgctcgccgaagacatgatcgtgcagcccagccacagcttctgccagccc
gagctgtcgttcgaggaatatcgcggcatcccgcgcaacgcccgccaccgccgcgcgctg
cgcctcgcgatcctcacccgcgaacccggcaactactcgacccgccggcttatcgagtcg
gccgaggcccgcggccacaccatggaggcgatcgacacctcgcgctgctacatgaacatc
cacgccgtcggcggcgaggtgcactatgacggtcgccgcctgccgcactacgacgcggtg
attccgcgcatcggcgcctcggtcacctcctacggcacagcggtcgtgcgccagttcgag
acgatgggcacctactgcctgtccggctccgagggcatcaccacctcgcgcgacaagctg
cacgcccaccaggtgctcgcccgcaaccgcatcggcaccccgaccaccgccttcgcccgc
agccccaaggattcgggcaacgtcatcagcctcgtgggcggcgcgccgcttgtgctgaaa
ctgctcgaaagcacccagggcaagggcgtcgtgctggccgagaccaagaaggcggcggaa
tcggtgatctccgccttccagggcctcaaggccgacttcctcgtgcagagtttcgtcaag
gaagccgccggcgaggacatccgctgcttcgtcgtcggcggcaaggtcgtggctgccatg
cgccgcaagggcaagcccgacgacttccgctccaacctgcaccagggcggcaccgccgag
acggtgcgcatcacccgtaccgagcgcgaagccgccatccgtgccgcccgcgccatgaaa
ctcgacgtggccggcgtcgacctgctgcgtggcgaggacggccccaaggtgctcgaggtc
aactcctcgcccgggctcgagggcatcgagaagacctccggcaaggacatcgccggcctg
gtgatcgcccatatcgaggacaaggtcgccccaaggccgccgcgcccccgcagccgcacg
aagcgcagcgcccgctga
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