Salipiger profundus: Ga0080559_TMP1619
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Entry
Ga0080559_TMP1619 CDS
T04656
Name
(GenBank) C-5 cytosine-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
tpro
Salipiger profundus
Pathway
tpro00270
Cysteine and methionine metabolism
tpro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Ga0080559_TMP1619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpro03000
]
Ga0080559_TMP1619
03032 DNA replication proteins [BR:
tpro03032
]
Ga0080559_TMP1619
03036 Chromosome and associated proteins [BR:
tpro03036
]
Ga0080559_TMP1619
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
tpro02048
]
Ga0080559_TMP1619
Enzymes [BR:
tpro01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
Ga0080559_TMP1619
Transcription factors [BR:
tpro03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
Ga0080559_TMP1619
DNA replication proteins [BR:
tpro03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
Ga0080559_TMP1619
Chromosome and associated proteins [BR:
tpro03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
Ga0080559_TMP1619
Prokaryotic defense system [BR:
tpro02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
Ga0080559_TMP1619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
APX22415
UniProt:
A0A1U7D2V4
LinkDB
All DBs
Position
complement(1113112..1113882)
Genome browser
AA seq
256 aa
AA seq
DB search
MVADGHSPFRIGISVEKEASAHRTLTLRAFLREYRSRHGTLPRKFIDFHAGHAPEPDWSE
VDADAWRAAIEEARALELGTETAADAIDAAIDRLKARYDDTILIGGPPCQAYSLVGRARS
RGKVGYVPEEDERHYLFREYIRVLDELRPAAFVMENVKGMLSSTVESRLVFEMLMEDLSS
LGTDHGHEYELRAIRIQDGKACLQEAMRPSDFIVRAEAFGIPQKRHRVIIIGIRSDLAVA
LPLNLRHDAFGDIFCP
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgcggacggccactcgccgttccggatcggcatttcggtcgagaaggaggcctcg
gctcaccggactctgacgctgcgtgcattcctgcgcgagtatcggtcgcggcacggcacc
ttgcctcggaagttcatcgatttccatgcgggacacgctcctgaaccagactggtcagaa
gtcgacgccgatgcgtggcgagccgctatcgaagaagcacgtgccctcgagctcggaacc
gagacagccgcggacgcaattgacgccgccatcgacagactcaaggctaggtatgacgat
acgatcctgatcggtggcccgccgtgtcaggcctactcactcgtgggtcgggcgcggtcg
aggggcaaggtcggctacgtgcccgaggaggatgagcggcactacctgtttcgcgaatac
attcgggtgcttgatgagctccgtccggccgcgttcgtcatggagaacgtcaagggcatg
ctgtcctcgacggtcgaaagccgcctcgtgttcgagatgctgatggaagacctctcctcg
ctcgggacggaccatggtcatgagtacgagctgcgcgctatccggatccaagacggcaag
gcctgcttgcaggaggcaatgcggccatcggatttcatcgtccgtgccgaagcgtttggc
attccccaaaaacgacatcgggtgatcatcatcgggatccgttccgacctcgctgtcgcg
ttgcccttaaatctgagacacgacgcgttcggggatattttttgcccttaa
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