Salipiger profundus: Ga0080559_TMP1678
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Entry
Ga0080559_TMP1678 CDS
T04656
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
tpro
Salipiger profundus
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpro03021
]
Ga0080559_TMP1678
03009 Ribosome biogenesis [BR:
tpro03009
]
Ga0080559_TMP1678
Transcription machinery [BR:
tpro03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Ga0080559_TMP1678
Ribosome biogenesis [BR:
tpro03009
]
Prokaryotic type
rRNA transcription factors
Ga0080559_TMP1678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_2
KH_NusA_C
S1
KH_1
HHH_2
Motif
Other DBs
NCBI-ProteinID:
APX22474
UniProt:
A0A1U7D2T1
LinkDB
All DBs
Position
complement(1174736..1176376)
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AA seq
546 aa
AA seq
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MAITSANQLELLQTAEAVAREKMIDPTLVIEAMEESLSRAAKSRYGSEMDIRVSIDRKTG
RATFTRVRTVVEDEELENYQAEMTVAQAKQYMADPKVGDQYVEEVPPVDMGRIAAQSAKQ
VILQKVREAERDRQYDEFKDRAGTIINGTVKREEYGNVIVDIGRGEGILRRNEKIGREAY
RPGDRIRCYIKDVRREARGPQIFLSRTAPEFMAELFKMEVPEIYDGIIEIKAVARDPGSR
AKIGVISYDGSIDPVGACVGMRGSRVQAVVNELQGEKIDIIPWNEDMPTFLVNALQPAEV
SKVVLDEDAERIEVVVPDEQLSLAIGRRGQNVRLASQLTGLDIDIMTEEEESQRRQKEFE
ERTQLFMDTLDLDEFFAQLLVAEGFTNLEEVAYVELDELLVIDGVDEDTAQELQTRAREF
LEEQARKALEKARELGAEDSLIDFDGLTPQMVEALAEDGIKTLEDFATCADWELAGGWTI
SDGERVKDDGLLEPFDVDLAEAQNLIMTARVLLGWVDPAELEPEVDEDEEADDTEVEAGA
ETGEEA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcacctctgccaaccagcttgagcttctgcagaccgccgaggccgtggcgcgc
gagaagatgatcgaccccacgctcgtgatcgaggcgatggaagaaagcctctcgcgggcc
gccaagagccgttacggctccgagatggacatccgcgtcagcatcgaccgcaagaccggc
cgcgcgacctttacccgcgtccgcaccgtggtcgaggacgaggaactcgagaactaccag
gccgagatgacggtcgcgcaggccaagcagtacatggccgaccccaaggtgggcgaccag
tacgtcgaggaagtgccgccggtcgacatgggccggatcgcggcgcagtcggccaagcag
gtcattctgcagaaggtccgcgaagccgagcgtgaccgccagtacgacgagttcaaggac
cgcgccggcaccatcatcaacggcaccgtcaagcgtgaggaatacggcaacgtcatcgtc
gacatcggccgtggcgaaggcatcctgcgccgtaacgagaagatcggccgcgaggcgtat
cgccccggcgaccgcatccgctgctacatcaaggacgtgcgccgcgaagcgcgtgggccg
cagatcttcctgtcgcgcaccgcgccggaattcatggccgagctgttcaagatggaagtg
cccgagatctacgacggcatcatcgagatcaaggccgtggcccgcgaccccggttcgcgc
gccaagatcggcgtcatctcctatgacggctccatcgaccccgtgggcgcctgcgtcggt
atgcgcggcagccgcgtgcaggccgtggtgaacgagctgcagggcgagaagatcgacatc
atcccgtggaacgaggacatgccgaccttcctcgtgaacgcgctgcagcccgccgaggtg
agcaaggtggttctcgacgaggacgccgagcgcatcgaggtcgtggtgcccgacgagcag
ctctcgctggccatcggccgccgcggtcagaacgtgcgcctcgcgtcgcagctgaccggc
ctcgacatcgacatcatgaccgaggaagaggaaagccagcgccgccagaaggaattcgag
gagcgcacccagctgttcatggacacgctcgatctcgacgagttcttcgcgcagctgctc
gtggccgagggcttcaccaacctcgaggaagtggcctatgtcgagctcgacgagcttctg
gtcatcgacggcgtcgacgaggacaccgcgcaggagcttcagacccgtgcccgcgaattc
ctcgaagagcaggcccgcaaggcgctcgagaaggcgcgcgaactgggtgccgaggacagc
ctcattgacttcgacggcctcacaccccaaatggtagaggcattggcggaagacggcatc
aagacgctggaagacttcgccacctgtgccgactgggaactggccggtggctggacgatc
agcgacggcgagcgcgtcaaggatgacggccttctcgaacccttcgacgtggaccttgcc
gaggcgcagaacctcatcatgaccgcccgggtccttctgggctgggtcgatcccgccgag
ctcgaacccgaggtcgacgaggacgaagaggccgatgacaccgaggtcgaggcaggcgcc
gagaccggggaagaggcctga
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