Salipiger profundus: Ga0080559_TMP1925
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Entry
Ga0080559_TMP1925 CDS
T04656
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
tpro
Salipiger profundus
Pathway
tpro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ga0080559_TMP1925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpro03019
]
Ga0080559_TMP1925
Enzymes [BR:
tpro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Ga0080559_TMP1925
Messenger RNA biogenesis [BR:
tpro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Ga0080559_TMP1925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
APX22721
UniProt:
A0A1U7D3J2
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All DBs
Position
1430776..1431867
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AA seq
363 aa
AA seq
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MLEGGGHLAYVVGGCVRNALMGVPVSDVDIATDARPERVMALAEAAGLKPVPTGIDHGTV
TVVAEGIGHEVTTFRADVETDGRRAVVRYSDDISEDAARRDFTMNALYADARGDVLDPLG
GLPDLEARRVRFIRDAGERIREDYLRILRFFRFNAWYGDPEQGVDPEALAGIAANLDGLS
TLSAERVGHEITRLLSANDPAPSVGVMEQVGVLPQVLPGATARALGPLVAHEAALGLAPD
PMRRLAGLGFSDGRSLRLSKAQQKQLEAYQSLISATAGPAEIAWRKGAEMARGVVALRAA
SFGAPVSPDAATEIETGAAAVFPVKPRDLMPDYEGPALGRKLEELQRRWIDSGFALTRED
LLS
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgctcgagggcggtggccatctggcctatgtcgtcggcggctgcgtgcgcaacgcgctg
atgggcgtgccggtgagtgatgtggacatcgccaccgatgcccgccccgagcgggtcatg
gcgctggccgaggcggcgggactgaagccggtgcccaccggcatagaccacggcaccgtg
acagtcgtcgccgagggcatcggccacgaggtcaccacctttcgtgccgatgtcgagacc
gacggacggcgcgcggtggtgcgctattcggacgacatctccgaagatgccgcgcggcgc
gatttcaccatgaacgcgctctacgccgatgcgcggggcgatgtgctcgatccgctgggt
gggttgcccgacctcgaagcgcggcgggtgcgcttcatccgcgacgctggcgagcgcatc
cgcgaagattaccttcgcatcctgcgcttcttccgcttcaacgcctggtatggcgacccc
gagcagggcgtcgaccccgaggcgctggcaggcatcgccgccaatctcgacgggctctcg
acgctctcggccgagcgggttgggcacgagatcacccggcttctgtcggcgaacgacccc
gcgccctcggtcggcgttatggaacaggtcggtgtcctgccgcaggtgctgccgggggcg
acggcccgtgcgctcgggccgctcgtcgcccatgaggcggcgctgggccttgcccccgat
ccgatgcgccggctagccggcctgggcttttccgatggccgcagcctgcggctgtcgaag
gcgcaacagaagcaactcgaggcgtatcagagcctcatttccgccaccgcaggccccgcc
gagatcgcctggcgcaagggggcagagatggcgcgcggcgtggtcgccctgcgtgcggca
agcttcggcgcgccggtttctcccgatgccgccaccgagatcgaaaccggcgcggcggcg
gtgtttcccgtgaaaccccgcgacctcatgcccgactacgaagggccggcactgggccgg
aagctcgaggagctgcagcgccgctggatcgactccggctttgccctgacccgcgaggac
ctgctgtcgtga
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