Salipiger profundus: Ga0080559_TMP1932
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Entry
Ga0080559_TMP1932 CDS
T04656
Name
(GenBank) Ykud domain-containing protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
tpro
Salipiger profundus
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tpro01002
]
Ga0080559_TMP1932
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tpro01011
]
Ga0080559_TMP1932
Peptidases and inhibitors [BR:
tpro01002
]
Cysteine peptidases
Family C82
Ga0080559_TMP1932
Peptidoglycan biosynthesis and degradation proteins [BR:
tpro01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Ga0080559_TMP1932
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
APX22728
UniProt:
A0A1U7D3P6
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All DBs
Position
1438851..1439441
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AA seq
196 aa
AA seq
DB search
MAKTGFDRRAFLAGGAALLGTPALAQGMNANETVEIERNVSSVIRRNVSSFRTMDWQPYF
DSLNNGAILVDIDSRALHFWEQNGAYHLYPCSVPLTEDLTRRGRTRVVLKDPEPDWRPTP
SMKERNPEWPDYVGPGPDNPLGTRAMHLSWTYYRIHGTHDTRKIGRRSSNGCIGLYNEHI
EALYDMSKVGTQVLLI
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggccaagacaggttttgatcgccgcgcctttcttgcagggggcgccgcgcttctcgga
acgcccgcgctcgcgcagggaatgaacgcaaacgaaaccgtcgagatcgagcggaacgtc
tcgtcggtgatacgccgcaacgtgtcgagcttccgcacgatggactggcagccgtacttc
gactcgctcaacaatggcgcgatcctggtcgacatcgactcgcgtgcgctgcacttctgg
gagcagaacggcgcctaccatctctacccgtgctcggtgccgctgaccgaggatcttaca
cgccgtggccgcacccgtgtcgtgctcaaggatcccgagcccgactggcggccgacgccc
tcgatgaaagagcgcaacccggagtggcccgactacgtcggccccggcccggacaacccg
cttggcacccgcgccatgcacctcagctggacctactaccggatccacggcacccacgac
acgcgcaagatcgggcgccgctcttcgaacgggtgcatcggtctctacaacgagcacata
gaggcactttacgacatgtcgaaagtcggcacgcaggtgttgcttatttga
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