Salipiger profundus: Ga0080559_TMP1951
Help
Entry
Ga0080559_TMP1951 CDS
T04656
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
tpro
Salipiger profundus
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpro03400
]
Ga0080559_TMP1951
Enzymes [BR:
tpro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ga0080559_TMP1951
DNA repair and recombination proteins [BR:
tpro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Ga0080559_TMP1951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
APX22747
UniProt:
A0A1U7D3K2
LinkDB
All DBs
Position
complement(1455978..1458908)
Genome browser
AA seq
976 aa
AA seq
DB search
MFEPSDRPRVFALAPGVDFPAALVEGLRARMAGQPPEAMARVELIVNTTRMARRIRQIFD
EGPATLMPRMRMLGNVADPISLSHLPPPVSPLRRRLELTGLVSKLLDAQPDLAPRTALFD
LADSLATLMDEMQDEGVFPDDIAALDVSDESGHWQRALTFFNIVQQYFGDTPEAPDVNAF
RRLALEQRLRDWEEQPPEHPVILAGSTGSRGMTNRLMQAVSKLPQGALVLPGFDFDTPQA
VWDGLTDALSGEDHPQFRFARLMHDLGFTADTLPRWSDTPEPNPGRNRLVSLALRPAPVT
DQWRDEGPKLPDLVAATDDLTLLEAPTQRDEATAIAMRLRKAAEEGVTAALITPDRMLTR
QVTAALDRWNILPDDSAGTPLQLTPPGRFLRHVASLFQQDLSAEALLTLLKHPLTHSGHD
RGAHLRATRELELHIRDKSWPYPQPEKLREWGNANEMGAWADWVADCFCQPPVPGTRSLS
DWLDTHVARAESIATGPEGTDSELWKERAGRKTRAVVEGLQAEAGFGTDLDARDYADLFN
AVLSREELRDRDAPHPKILIWGTLEARVMGADLLILGGLNEGSWPELPGADPWLNRRMRH
KAGLLVPERRIGLAAHDFQQAVAAPEVWLTRALKSDDAETVPSRWVNRLMNLMNGLPGQN
GPQALRAMQTRGADWLGLVRALETPEPSPPATRPSPAPPVEARPRSLSVTEIKTLIRDPF
HIYAKRVLRLRQLNPLQRAPDALLRGTLIHEVLEQFVKESVSDPARLEVSELMRMAGEIL
GDPAIVPYPTTRHLWTSRIGRVAEWFVETERARQAIAHPTHFEQMGYGEIPALGFTLRGK
ADRIDIDERGNAHLYDYKTGNAPSAKEQRHFDKQLLLEAAMVERGAFRELQPRHTERAVF
VALGSTPKEVPAPLDEVPAAQVWAEFETLITRWFERDRGYTARAALLKEKDVSDYDHLAR
FGEWDVIDPADREELE
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagccgtccgaccgcccccgcgtcttcgcgcttgcccccggcgtcgacttcccc
gccgcgctggtcgagggcttgcgggcccgcatggccgggcagccgcccgaggcaatggcc
cgcgtcgagctgatcgtgaacaccacccgcatggcacggcgcatccggcagatcttcgac
gagggcccggcgaccctgatgccgcggatgcggatgctcggcaatgtcgccgacccgatc
tcgctgtcgcacctgccgccaccggtctcaccgctgcgccggcggctcgagctgacggga
ctggtgtcgaaactgctcgacgcgcagccggacctcgccccgcgcacggcgctgttcgat
ctggccgacagtctcgccacgctgatggacgagatgcaggacgaaggcgtctttcccgac
gatatcgccgcgctcgacgtgagcgacgaatccggccactggcagcgcgcgctcacgttt
ttcaacatcgtgcagcagtatttcggcgatacgcccgaggcgcccgacgtgaacgccttt
cggcgtcttgcgctggaacagagactgagggactgggaagagcagccgcccgagcacccg
gtgatccttgccggctcgaccggatcgcgggggatgaccaaccggctgatgcaggcggtc
tcgaagctgccgcagggcgcgctggtgctgccgggcttcgacttcgacacgccgcaagcg
gtctgggacgggctgaccgacgcgctctcgggcgaggatcacccgcagttccgctttgcc
cggctgatgcacgatctcggcttcaccgcggacacgcttccgcgctggtccgacacgccc
gaaccgaacccggggcgcaaccggctggtctcgctggcgctgcggcccgcgccggtcact
gaccagtggcgcgacgagggaccgaaactgcccgatctcgtggccgccaccgatgacctg
acgctgctcgaggcgccgacccagcgcgacgaggccacggccatcgccatgcgcctgcgc
aaggccgccgaagagggtgtgaccgccgcgctgatcacacccgaccggatgctgacacgg
caggtcacggcggcgctcgaccggtggaacatcctgcccgacgacagcgccggcacgccg
ttgcagctgaccccgccgggccgcttcctgcgccatgttgcgagcctgttccagcaggat
ctttccgccgaggcgctgctcaccctgctcaagcatccgctcacccactccggccacgat
cgcggcgcacacctgcgcgccacacgcgagctcgagctgcacatccgcgacaagtcatgg
ccctatccgcagcccgagaagctgcgcgaatggggcaatgccaacgagatgggtgcctgg
gccgactgggtcgccgactgtttctgccagccgccggtgccgggcacgcgctccctgtcc
gactggctcgacacccatgtcgcccgcgccgagtccatcgccacaggtccggagggcacc
gactcggagctgtggaaggaacgcgccggacgcaagacccgcgccgtggtcgaggggctg
caggccgaggcgggcttcggcaccgatctcgatgcccgcgactacgccgacctgttcaac
gcggtcctgtcacgcgaagagctgcgcgaccgcgatgcgccgcacccgaagatcctcatc
tggggcacgctcgaggcgcgcgtgatgggcgcagacctgctgatcctcggcgggctcaac
gaaggctcgtggcccgagctgcccggcgccgatccgtggctcaaccggcggatgcggcac
aaggcgggtctgctcgtgcccgagcgccgcatcggtctggccgcgcatgacttccagcag
gcagtggccgcccccgaggtctggctgacccgcgcgctcaagtcggacgatgccgagacc
gtcccctcgcgctgggtgaaccggctgatgaacctgatgaacggtctgcccggacagaac
ggcccgcaggccctcagggcgatgcaaacccgtggcgccgactggctggggctggtgcgc
gcgctcgagacaccggaaccgagcccgcccgccacgcgcccctcgcccgccccgccggtc
gaggcacggccgcgcagcctctcggtgaccgagatcaagacactgatccgcgatcccttc
cacatctacgccaagagggtgctgcggctgcggcagctgaacccgctgcaacgcgccccc
gacgcgctgctgcgcggcacgctgatccacgaggtgctggagcagttcgtcaaggaaagc
gtctctgatccggcccggctcgaggtctcggagctgatgcgcatggccggcgagatcctc
ggcgatcccgcgatcgtgccctacccgaccacgcgccacctgtggacctcgcggatcggc
cgggttgccgagtggttcgtagagaccgagcgcgcgcggcaggccatcgcgcacccgacc
catttcgaacagatgggatacggcgagattccggcgcttggcttcacgttgcgcggcaag
gccgaccggatcgacatcgacgagcggggcaacgcgcatctctacgactacaagaccggc
aacgcgcccagcgccaaggaacagcggcacttcgacaagcagcttctgctcgaggccgcc
atggtcgaacgcggcgccttccgcgagttgcagcctcggcacaccgaacgggcggtcttc
gtcgcgctcggcagcaccccgaaagaggtgcccgcgccgctcgacgaggtgccggcggcg
caggtctgggccgagttcgagacgctcatcacccgctggttcgagcgcgaccggggctac
accgcccgcgccgcgctgctgaaggaaaaggacgtgtccgactacgatcaccttgcccgt
ttcggagagtgggacgtgatcgacccggccgaccgcgaggaactggaatga
DBGET
integrated database retrieval system
