Salipiger profundus: Ga0080559_TMP2298
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Entry
Ga0080559_TMP2298 CDS
T04656
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tpro
Salipiger profundus
Pathway
tpro03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Ga0080559_TMP2298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpro03021
]
Ga0080559_TMP2298
03400 DNA repair and recombination proteins [BR:
tpro03400
]
Ga0080559_TMP2298
Enzymes [BR:
tpro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Ga0080559_TMP2298
Transcription machinery [BR:
tpro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Ga0080559_TMP2298
DNA repair and recombination proteins [BR:
tpro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Ga0080559_TMP2298
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Glyco_hydro_65C
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
APX23094
UniProt:
A0A1U7D4K3
LinkDB
All DBs
Position
complement(1826376..1827392)
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPTQLEVRPGADPARVATVVAEPLERGFGLTLGNALRRVLLSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIVLNLKGVSLRMEVEGPKRLSVNAKGPGVVTAADIAE
SAGIEVLNKDHVICHLDDGADLYMELTVNTGKGYVSADKNKPEDAPIGLMPIDAIYSPVK
KVAYEVTPTREGQVLDYDKLTMKVETDGSVTPEDAIAFAARILQDQLSIFVNFDEPESAS
RQDDDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSSMGLHLGMDVEDWPPDNIEDLAKKLEDQF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagaactgggctgaacttatcaagccgacccagctggaggttcgccccggc
gccgatccggcccgcgtcgctaccgtcgtcgccgaaccgctcgagcgcggctttggcctg
acgctgggcaacgctctgcgccgcgtgctgctgtcgagccttcagggtgcggccatcacc
agcgtgcagatcgacaacgtgctgcacgaattctcctccgtcgccggtgtgcgtgaagac
gtgaccgatatcgtcctgaacctcaagggcgtgtcgctgcgcatggaggtcgaaggaccc
aagcgcctgtccgtcaacgccaaggggccgggcgtcgtcaccgccgccgacatcgccgag
agcgctggcatcgaggtgctgaacaaggaccatgtgatctgccacctcgacgatggtgcg
gatctctacatggagctgaccgtcaacaccggcaagggttacgtctcggctgacaagaac
aagccggaagacgcgcccatcggcctgatgccgatcgacgccatctattcgccggtcaag
aaggtcgcctacgaagtcacgcccacccgtgagggccaggtgctggactacgacaagctg
accatgaaggtcgagaccgacggttcggtcacccccgaggacgccatcgcattcgcggcg
cgcatcctgcaggatcagctgtcgatcttcgtcaacttcgacgagccggaatcggcctcg
cgtcaggacgacgacgacggtctcgagttcaacccgctcctcctcaagaaggtggacgag
ctcgagctgtccgtgcgttcggcgaactgcctgaagaacgacaacatcgtctacatcggc
gacctgatccagaagaccgaagccgagatgctccgcaccccgaacttcggccgcaagtcg
ctgaacgagatcaaggaagtgctgtcctccatgggtctgcacctcggcatggacgtcgag
gactggccgccggacaacatcgaggatctcgcgaagaaactggaagaccagttctga
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