Salipiger profundus: Ga0080559_TMP2345
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Entry
Ga0080559_TMP2345 CDS
T04656
Name
(GenBank) ATP-binding cassette, subfamily C
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
tpro
Salipiger profundus
Pathway
tpro02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ga0080559_TMP2345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpro02000
]
Ga0080559_TMP2345
02044 Secretion system [BR:
tpro02044
]
Ga0080559_TMP2345
Transporters [BR:
tpro02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Ga0080559_TMP2345
Secretion system [BR:
tpro02044
]
Type I secretion system
Multiple protein transporter
Ga0080559_TMP2345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_16
AAA_30
AAA_22
AAA_29
MMR_HSR1
RsgA_GTPase
AAA_33
AAA_21
AAA_18
Zeta_toxin
Dimerisation
AAA_28
Motif
Other DBs
NCBI-ProteinID:
APX23141
UniProt:
A0A1U7D4Q8
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All DBs
Position
1864402..1866096
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AA seq
564 aa
AA seq
DB search
MRAARRQSRPYFWFVAIFSFFVNLLMLTGPLYMLQIYDRVLGSRSEATLLALSVLVVFLY
GMMGILDYARGRVMARVAARFQAAMDVRVFEAVMRRSAVKPDELAATGLKDLESVQRLMS
SPVLMAFFDIPWTPFFIAGIFVFHPWLGVLALTGGLILVAVTGLNQLLSRKPTLKSNRAV
MQAEHTSEQIRNEAEMVQSLGMRDAAFRRWYKARAAALKGTIGSADVIGTFTVITKTFRL
FLQSAMLGLGAYLVLQNQLTPGAMIAGSILMGRALAPIELAIGQWPMVTRARTGWDNLAQ
LLSEVPPEEPRLPLPKPKALLEVTQATIVPPGEHQASLRLVSFNLMPGQALGVIGPSGAG
KSTLARALTGVWRPAGGKIRLDGATLDQYGQDLGKHIGYLPQRVTLFDGSIAENIARLSE
APDSQAIVEAARKADAHEMILKLPDGYNTRVTAAGGRLSGGQMQRIGLARAMYGDPVILV
LDEPNSNLDNEGSEAVNEAIRRMKAEGKSVIIMAHRPAAIRECDMLLMLENGARAAFGPK
DEVLRSRVKNHDQIARNAGPGGVR
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
ttgcgggcagcacgtcggcaaagccgaccctatttctggttcgtggcgatcttcagtttc
ttcgtgaacctgctgatgctcacagggccgctctacatgctgcagatctacgaccgcgtg
ctcggctcgcggtccgaggcgacactgctggcgctctcggtgctggtggtcttcctctac
ggcatgatgggcattctcgactatgcccgtggccgggtgatggcgcgggtcgccgcccgg
ttccaggcggcgatggacgtgcgcgtcttcgaggcggtgatgcgccgctcggctgtgaaa
cccgacgagcttgccgcgaccggtctcaaggatctcgagtcggtgcagcggctgatgtcc
tcgccggtgctcatggccttcttcgacatcccgtggacgcccttcttcatcgccgggatc
ttcgtgttccacccctggcttggcgtgctcgcgctgactggcgggctgatcctcgtggcg
gtcaccgggctgaaccagctgctcagccgcaagcccacgctgaaatcgaaccgcgccgtc
atgcaggccgagcacacgtcggagcagatccgcaacgaggccgagatggtgcagtcgctg
gggatgcgcgatgccgcattccggcgctggtacaaggcccgcgcggcggcgctcaagggc
accatcgggtcggccgacgtgatcggcaccttcaccgtcatcaccaagaccttccggctg
ttcctgcagtccgcgatgctggggctcggcgcctatctcgtgctgcagaaccagctgacg
cccggcgcgatgatcgccggttcgatcctcatgggccgcgcgctcgcgcccatcgagctt
gccatcggccaatggcccatggtgacccgtgcccgcaccggctgggacaacctcgcgcag
ctgctgtccgaggtgccgcccgaagagccgcgcctgccgctgcccaagcccaaggcgctg
ctcgaggtcacgcaggccaccatcgtgccgccgggcgagcatcaggcctcgctgcgtctc
gtcagcttcaacctgatgccggggcaggcgctgggcgtgatcggtccgtcgggcgcgggc
aagtccacgctggcgcgtgcgctcaccggggtctggcgtccggcggggggcaagatccgt
ctcgacggggcgacactcgatcaatacgggcaggatctcggcaagcacatcggctacctg
ccgcagcgcgtgacgctgttcgacggcagcattgccgagaacatcgcgcggctgtccgag
gcgccggattcgcaggccatcgtcgaggcggcacgcaaggccgacgcgcacgagatgatc
ctgaagctgcccgacggctacaacacccgtgtcacagctgccggcgggcggctgtccggc
ggccagatgcagcggatcggcctcgctcgggcgatgtacggcgacccggtcatcctggtg
ctcgacgagcccaactcgaacctcgacaacgaggggtcggaagcggtgaacgaggcgatc
cgccggatgaaggccgagggcaagtcggtcatcatcatggcgcaccgccccgcggccatc
cgtgaatgcgacatgcttctgatgctcgagaacggcgcccgcgcggcctttggccccaag
gacgaggttctgcgctcgcgggtcaagaaccacgatcagatcgcccgcaacgccgggccg
ggaggcgtgagatga
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