Salipiger profundus: Ga0080559_TMP2377
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Entry
Ga0080559_TMP2377 CDS
T04656
Name
(GenBank) transcriptional regulator, LacI family
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
tpro
Salipiger profundus
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpro03000
]
Ga0080559_TMP2377
Transcription factors [BR:
tpro03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Ga0080559_TMP2377
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
LacI
Peripla_BP_3
Peripla_BP_4
HTH_10
HTH_23
Sigma54_DBD
Sigma70_r4
HTH_3
HTH_IclR
HTH_24
HTH_31
TrmB
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
APX23173
UniProt:
A0A1U7D4Y6
LinkDB
All DBs
Position
complement(1896178..1897200)
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AA seq
340 aa
AA seq
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MADDDPRPLTLRDVSEASGVSEMTVSRVLRNRGDVSEATRAKVLEAAKTLGYVPNKIAGA
LASQRVNLVAVIIPSMRNMVFPEVMAGISGVLEDTELQPVVGVTDYLPEKEERVLYEMLS
WRPSGVIIAGIEHTEASKAMLKASGIPVVEIMDTDGTPIDTAVGISHRRAGREMARAILK
AGYQKIGFLGTKMPLDYRARKRFEGFTEALAKGGVEVMEQEFYSGGSALAKGREMTRDIL
EREPELDFLYYSNDMIGAGGLLYLLEQGRDIPADIGLAGFNGVELLQGLPRKLATMDACR
DQIGRKAAEIIAARVEDADASFDKIIEMTPKITYGDTLRR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtggcagatgacgatccccgcccgttgacccttcgggatgtatccgaagcatccggcgta
tccgaaatgaccgtcagccgggtcttgcgcaacaggggggacgtctcggaggcgacccgt
gccaaggtgctcgaggccgcgaagacgctgggctacgtcccgaacaagatcgccggtgcg
ctcgccagccagcgggtgaacctcgtggcggtcatcatcccctcgatgcgcaacatggtc
ttccccgaggtcatggccggcatctcgggcgtgctcgaggacaccgagcttcagccggta
gtcggcgtgaccgactacctgccggagaaggaagagcgcgtcctctacgagatgctgtcg
tggcgcccctcgggcgtgatcattgccgggatcgagcacaccgaggcgtcgaaggcgatg
ctcaaggccagcggcatccccgttgtcgagatcatggataccgacggcacgccgatcgac
accgccgtgggcatcagccatcgccgcgccggccgcgagatggcccgggccattctcaag
gcgggctaccagaagatcggctttctcggcaccaagatgccgctcgactaccgggcccgg
aagcggttcgaaggcttcaccgaggcgctcgccaagggcggcgtcgaggtcatggaacag
gagttctactccggcggatcggcgcttgcgaaaggccgcgagatgacccgcgacatcctc
gagcgcgagcccgagctcgacttcctctactattcgaacgacatgatcggcgcgggcggc
ctgctctacctgctcgaacaggggcgcgacattcccgccgacatcggccttgcgggcttc
aacggggtcgagctgctgcagggactgccgcgcaagctggccacgatggatgcctgccgc
gaccagatcggcaggaaggctgccgaaatcatcgcggcccgggtcgaggacgccgatgcc
tccttcgacaagatcatcgagatgacgcccaagatcacctacggcgacacgctgcgtcgc
tga
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