Salipiger profundus: Ga0080559_TMP2465
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Entry
Ga0080559_TMP2465 CDS
T04656
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
tpro
Salipiger profundus
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpro03021
]
Ga0080559_TMP2465
Transcription machinery [BR:
tpro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Ga0080559_TMP2465
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
KORA
Phage_phiJL001_Gp84_N
Motif
Other DBs
NCBI-ProteinID:
APX23261
UniProt:
A0A1U7D534
LinkDB
All DBs
Position
1991092..1991970
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AA seq
292 aa
AA seq
DB search
MTPETFNDQTLSRRAMKAELLDADTELKLAYAWRDHRDEAALHRLINAYMRLAISMAAKF
KRYGAPMGDLIQEAGLGLMKAADKFDPDRGVRFSTYAVWWIKASIQDYVMRNWSMVRTGS
TSSQKSLFFNMRRVQARLEREAAAEGRSLERHVLQAAIAEEIGVPLTDVQMMEGRLSGSD
FSLNATQSTDEDGREWIDTLEDDGEQSAQLVEGRLDNAQLREWLVTALTALNERERFIVR
ERKLREETRTLESLGQELGLSKERVRQLEAAAFTKMRKSLEAQSREVQHFLA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgacaccagagaccttcaacgaccagaccctctcgcggcgcgccatgaaggccgagctg
ctcgatgcggataccgagctcaagctcgcctacgcctggcgtgatcaccgggacgaggct
gcgctgcatcggctcatcaacgcctacatgaggctagctatctcgatggcggccaagttc
aagcgttacggtgcgccgatgggcgacctgatccaggaagcgggtcttggcctgatgaag
gccgcggacaagttcgacccggatcgcggtgtgcggttctcgacctacgcggtctggtgg
atcaaggcgagcatccaggattacgtgatgcgcaactggtccatggtccggaccggctcg
acctcgtcgcagaagtcgctcttcttcaacatgcgccgcgttcaggcccggctcgagcgc
gaagccgccgccgagggtcgctcgctggagcgtcacgtgcttcaggccgccatcgcagaa
gagatcggcgtgccgctgactgacgtgcagatgatggaagggcgcctttcgggttccgac
ttttcgctgaacgcgacgcaatccaccgacgaggacggtcgcgagtggatcgacacgctc
gaggacgacggcgagcagagcgcccagcttgtcgagggccggctggacaacgcacagctg
cgcgagtggctggtgacggcgctgaccgcgctgaacgagcgcgagcgcttcatcgtgcgc
gaacgcaagctgcgcgaagagacccgcacgctggaaagcctcggtcaggaactcggcctg
tcgaaagagcgcgtgcgccagcttgaagcggctgccttcaccaagatgcgcaagtcgctt
gaagcgcagtcgagggaagtgcaacacttcctcgcatga
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