Salipiger profundus: Ga0080559_TMP2473
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Entry
Ga0080559_TMP2473 CDS
T04656
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tpro
Salipiger profundus
Pathway
tpro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ga0080559_TMP2473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpro03019
]
Ga0080559_TMP2473
03110 Chaperones and folding catalysts [BR:
tpro03110
]
Ga0080559_TMP2473
03029 Mitochondrial biogenesis [BR:
tpro03029
]
Ga0080559_TMP2473
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpro04147
]
Ga0080559_TMP2473
Enzymes [BR:
tpro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Ga0080559_TMP2473
Messenger RNA biogenesis [BR:
tpro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Ga0080559_TMP2473
Chaperones and folding catalysts [BR:
tpro03110
]
Heat shock proteins
HSP60 / Chaperonin
Ga0080559_TMP2473
Mitochondrial biogenesis [BR:
tpro03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Ga0080559_TMP2473
Exosome [BR:
tpro04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Ga0080559_TMP2473
Exosomal proteins of other body fluids (saliva and urine)
Ga0080559_TMP2473
Exosomal proteins of breast cancer cells
Ga0080559_TMP2473
Exosomal proteins of colorectal cancer cells
Ga0080559_TMP2473
Exosomal proteins of bladder cancer cells
Ga0080559_TMP2473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
APX23269
UniProt:
A0A1U7D556
LinkDB
All DBs
Position
complement(1999780..2001423)
Genome browser
AA seq
547 aa
AA seq
DB search
MSAKDVKFDTDARNRMVRGVNILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIVKEGVKAVSAGMNPMDLKRGI
DLATTKVVEAIKAAARPVNDSNEVAQVGTVSANGEAEIGKMIADAMQKVGNEGVITVEEN
KGLETETDVVEGMQFDRGYLSPYFVTNADKMIAELDDCLILLHEKKLSSLQPLVPLLEQV
IQSQKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQV
ISEDLGMKLENVTMDMLGTAKTVTITKDETTIVDGAGEKSEIEARVSQIRTQIEETTSDY
DREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGIVVGGGVALV
QGAKALDGLEGANSDQNAGIAIVRKALEAPLRQIAENAGVDGSVVAGKIRESNDLKFGYN
AQTDEYGDMFSFGVIDPAKVVRTALEDAASVSGLLITTEAMVADKPQKEGAAPAPDMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaaggacgtgaagttcgataccgacgcccgcaaccggatggtccgtggcgtg
aacatcctcgccgacgccgtgaaggtcacgctgggccccaagggccgcaacgtggtgctc
gacaagtccttcggcgcgccccgcatcaccaaggacggtgtttcggtcgccaaggaaatc
gaactggaagacaagttcgagaacatgggcgcccagatggtgaaggaagtcgcttcccgc
accaacgacgaagcgggtgacggcaccaccaccgcgacggttctggcacaggccatcgtc
aaggaaggcgtgaaagccgtttccgccggcatgaacccgatggacctgaagcgcggcatc
gacctcgcaaccaccaaggtcgtcgaggccatcaaggccgccgcacgcccggtgaacgac
tccaacgaagtcgcacaggtcggcaccgtctccgccaacggcgaagccgagatcggcaag
atgatcgcggacgcgatgcagaaggtcggcaacgagggtgtcatcaccgtcgaagagaac
aagggcctcgagaccgagaccgacgtcgtcgaaggcatgcagttcgaccgtggctacctg
tcgccctacttcgtgaccaacgccgacaagatgatcgcagagctcgatgactgcctcatc
ctgctgcacgagaagaagctctcgtcgctgcagccgctcgtgccgctgctcgagcaggtg
atccagtcgcagaagccgctgctgatcatcgctgaagacgtcgaaggcgaagcgctggcg
accctcgtggtcaacaagctgcgcggcggcctcaagatcgcagccgtcaaggcaccgggc
ttcggcgaccgccgcaaggccatgctgcaggacatcgcgatcctgaccggcggccaggtg
atctcggaagacctcggcatgaagctcgagaatgtcaccatggacatgctcggcaccgcc
aagaccgtcaccatcaccaaggacgagaccaccatcgtcgacggtgcaggcgagaagtcg
gagatcgaggcacgcgtcagccagatccgcacgcagatcgaggaaaccacctcggactac
gaccgcgagaagctgcaggagcgtgttgccaagctcgcaggcggcgtcgcagtcatccgc
gtcggcggcatgaccgaagtcgaagtgaaagagcgcaaggaccgcgtcgatgacgccctg
aacgcgacccgcgcggccgtccaggaaggcatcgtggtcggcggcggcgttgccctcgtg
cagggtgccaaggccctcgacggtctggaaggcgccaacagcgaccagaacgccggtatc
gccatcgtgcgcaaggcgctggaagcaccgctgcgccagatcgcagagaacgcgggcgtc
gacggttcggtcgtcgctggcaagatccgcgaaagcaacgacctgaagttcggctacaac
gcccagaccgacgaatatggcgacatgttctcgttcggcgtgatcgacccggcaaaggtc
gtccgcaccgctctggaagacgccgcatcggtctccggcctgctcatcaccaccgaagca
atggtggcggacaagccgcagaaagaaggcgcagctccggcccccgacatgggcggcatg
ggcggcatgggcggcatgatgtaa
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