Salipiger profundus: Ga0080559_TMP2646
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Entry
Ga0080559_TMP2646 CDS
T04656
Name
(GenBank) UPF0042 nucleotide-binding protein
KO
K06958
RNase adapter protein RapZ
Organism
tpro
Salipiger profundus
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpro03019
]
Ga0080559_TMP2646
Messenger RNA biogenesis [BR:
tpro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Ga0080559_TMP2646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_29
AAA_16
AAA_22
Rad17
IIGP
RsgA_GTPase
AAA_28
AAA_30
AAA_27
T2SSE
Motif
Other DBs
NCBI-ProteinID:
APX23442
UniProt:
A0A1U7D5Q4
LinkDB
All DBs
Position
complement(2167908..2168834)
Genome browser
AA seq
308 aa
AA seq
DB search
MQEQSKGTQRVVLVTGPSGAGRSTAINALEDFGYEAIDNIPLSLIPRLLLEGGALGQPMA
LGVDIRNRDFSVQGLLDLHARLNKAPELDTQLLYLDCPADVLARRYSETRRRHPLAPDEN
YTQGIERELELLQDARSAADILIETGDLSPHDLRAQMAGWFADQTGQRMAIALHSFSYKR
GLPQGLDWVFDCRFLDNPHWEPSLRGQTGLDPAVTDYIARDIRFAPFLEQLTGLALFVLP
ACKEEGKAHLSFGFGCTGGQHRSVAVTEMVARALEEQGWQVSTRHRELERRGLDSRPGQG
AASGGRTA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaacagtcgaagggaacacagcgcgtcgtcctggtgaccggcccctcgggcgcc
gggcgctcgaccgcgatcaacgccctcgaggatttcggctacgaggccatcgacaacatc
ccgctgagcctgatcccgcgcctgcttctcgaagggggcgccctggggcagccgatggcc
ctgggggtcgacatccgcaaccgcgacttctcggtgcaggggcttctcgaccttcacgcc
cgactgaacaaggcgccggaactcgacacgcagctgctctacctcgactgccccgccgac
gtgctggccagacgctactcggagacgcgccgccggcatccacttgcccctgacgagaac
tacacccaggggattgaacgcgaactcgagctgttgcaggacgcccgcagcgccgccgat
atccttatcgagaccggcgacctgtcaccccacgatctgcgcgcccagatggcgggctgg
ttcgccgaccagaccgggcagcgcatggccatcgcgctgcattccttctcctacaagcgc
ggcctgccacaggggctcgactgggtgttcgactgccgcttcctcgacaacccgcactgg
gagccctcgctgcgcggccagaccgggctggatccggctgtgaccgactacatcgcccgc
gatatccgcttcgcccccttcctggagcagctcaccgggctcgcactcttcgtgcttccc
gcctgcaaggaagagggcaaggcacacctgtcgttcggcttcggctgtaccggcgggcaa
caccgctcggtcgcggtgacggaaatggtggcgcgcgcccttgaagagcagggctggcag
gtgtcaactaggcatcgcgaactggaacggcgggggctcgacagccgccccggacagggc
gcagcaagcggaggacgaacagcgtga
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