Salipiger profundus: Ga0080559_TMP2671
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Entry
Ga0080559_TMP2671 CDS
T04656
Name
(GenBank) 23S rRNA pseudouridine 2605 synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
tpro
Salipiger profundus
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpro03009
]
Ga0080559_TMP2671
Enzymes [BR:
tpro01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Ga0080559_TMP2671
Ribosome biogenesis [BR:
tpro03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Ga0080559_TMP2671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
DUF7393
Motif
Other DBs
NCBI-ProteinID:
APX23467
UniProt:
A0A1U7D5L4
LinkDB
All DBs
Position
complement(2189259..2190161)
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AA seq
300 aa
AA seq
DB search
MTKPPARPPARSKTPAASSGDTTTPPGDRIAKVLARAGVASRRDAERMIEEGRVAVNGKV
ITRAALNVTDRDRITVDDKPLEAPEAPRLWLYHKPAGLVTTTKDEQGRRTIFDALPEDLP
RVMSVGRLDLNSEGLLLLTNDGGIKRKLELPSTGWLRKYRVRVNGRPTDDMLAPLRAGIV
VDGQAFQPMEVTLDRQQGANAWLTIGLREGKNREIRRAMTDIGLSVNRLIRVSYGPFQLG
QLKQGEVEELRPRVVRDQLGLEGAKSNRPQPQRKRKPGPATGKPVRNGPPKGPAKGPKRR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagcctcctgcccgcccccctgcccgctccaagacgcccgccgcgtcttccggc
gacacgaccaccccgcccggcgaccgcatcgccaaggtgctcgcccgtgccggcgttgcc
agccggcgcgacgccgagcggatgatcgaggagggccgggtcgcggtgaacggcaaggtc
atcacccgcgcggcgctgaacgtcaccgaccgggaccggatcaccgtcgacgacaagccg
ctcgaggcgcccgaggcgccgcgtctctggctttaccacaagccggcggggctggtgacc
acgacgaaggacgagcagggccgccgcacgatcttcgacgcgctgcccgaggacctgccg
cgggtgatgagcgtggggcggctcgacctgaactcggaagggctgctgctgctgaccaac
gacggcggcatcaagcgcaagctcgagctgccctcgaccggctggctgcgcaagtaccgg
gtgcgggtcaacggccggcccaccgacgacatgctggcgccgctgcgcgcgggcatcgtg
gtggacgggcaggccttccagccgatggaggtgacgctcgaccgccagcagggcgccaac
gcctggctcaccatcgggctgcgcgagggcaagaaccgcgagatccgccgcgccatgacc
gatatcgggctgagcgtgaaccggctgatccgggtctcctacgggccgttccagctggga
cagctgaaacagggcgaggtcgaggagctgcgcccgcgcgtcgtgcgcgatcagctcggg
ctcgagggcgccaagtcgaaccgcccacagccccagcgcaagcgcaagcccggccccgcg
accggcaagcctgtgcggaacggtccccccaaggggccggcgaaaggtccgaagcggcgg
taa
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integrated database retrieval system
