Salipiger profundus: Ga0080559_TMP2988
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Entry
Ga0080559_TMP2988 CDS
T04656
Name
(GenBank) autotransporter secretion inner membrane protein TamB
KO
K09800
translocation and assembly module TamB
Organism
tpro
Salipiger profundus
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpro02000
]
Ga0080559_TMP2988
Transporters [BR:
tpro02000
]
Other transporters
Pores ion channels [TC:
1
]
Ga0080559_TMP2988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
APX23784
UniProt:
A0A1U7D6J5
LinkDB
All DBs
Position
complement(2541724..2546016)
Genome browser
AA seq
1430 aa
AA seq
DB search
MKRLLALLPLLFCLSLPAHAQDDDEGTRLERLIEGALSSDGTTVRVRGFRGALSSEATLD
RMTIADEQGIWLTLEDAELNWSRAALLTGRVEVSQITAQRLEVARLPAGGSDAPAPEASG
GSFSLPDLPVSVNIGEMSIERVELGEPILGEAVALGVAGSAQLADGEGEAQLSVQRLDGP
RDAITFDGSYVNESRQLAIDLAVDGAQDGLVTKLANLPGAPALKLTVNGEGPVDDFTADV
ALATDGEDRFSGTVTLEGVADEGQRFAADLSGDLRPLLPEDQRAFLGASQSIETRGMIEN
GGAIQLDALDLETATVSLDGSARIGADGWPERLLLDGRIASEDGEPVQIAFTQDVTRLDQ
ATLRLFYDRAQGDEFTLRALVEGLDRPEMALERATLSGQGTIARNAGSSVPGQVSGQLSL
ALEGLDLADASLADATGRDLRGGLQFDWQEGAPFEITGIDLNGAGIEVAGDVTLFGLSEG
NDPTVEPYISVRTDDLSRFSGVAGRDLGGAANFVLEGTMEPVAGRFDLSLSGTADDLSAD
IEQLDGLLAGRLTLAASAERNEGGTFLRQLDLDGRSITLSANGQLKTGESSGTFDLTLPD
LSLVDPNASGQLTASGTLDEGEAAYALDLEASGPGDTRIDGVVTARKGEDGGIVGVGFDG
TADSQRLAAFAPLIDRPLAGGLTFDGSGSYTLETGYFDTSGTLVTQDLEIGIPQVDGLLQ
GTTRAEVDAVRDDGGITIRDARVNGPGIRMTANGTLLSDASTATFDITLPELSRAAAGMT
GSASLQGELTESADAYLLDFSASGPGQTGASGELTATKSDDGSGPMGVASVSFDGTAEAG
ALSAFAPLVGRTLRGSLDFDGGGSYTLESSAFSAEGRLTTQDIALGIPTVDQLIGGTGRA
VVSARRDADGTITVDTLDVTTSQISATMSGSLGQSGNSALSYDVVLNNLGVIVEQLPGRA
TATGTLSGSGSGPWQVNTDLTAPGGTQARVTGSIAQSFDNANLGITGSAPLSLANTFIEP
NLLSGLARLDLRLDGPLAPASLSGTIRVDGAEAVLPGPALSLTGLDIETRLGGGQAQVSV
TGGLSTGGTLETTGTIGMTAPYRADLAVRLRDLLLEDRRLYQARADGRITVEGPLLTGPA
IGGWVEINEAELRIPETGMGPGSRSFTLNHVAEPSDVRATRARAGLLEQSGDGGGGSAYS
LPLDLEIRAPARIFVRGRGLDAELGGTLRLRGTSQDIVPEGRFDLIRGRLDILGQRLTLE
RAVLRLTGDFIPTIEVEAVTERDGNTITVAIEGEATSPEVSFSSTPSRPEEEVLALLLFG
RNVGELSAFQALRIAAAVNTLAGRGGEGIIGNLRQGFGLDDFDVTTDAEGNAGLRAGKYL
SENIYTDVEVDSSGETSIDLNLQVNKNVKARGRATSAGDTSLGIFYEKDY
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacggcttctcgcactactcccccttctgttctgcctctcccttccggcgcacgcg
caggatgacgacgaaggcacccgtctcgaacggctgatcgagggcgcgctgtcgtcggac
ggcaccaccgtccgggtgcgcggcttccggggcgcgctgagttccgaggcgacgctcgac
cgcatgaccatcgccgacgaacagggcatctggctcacgctcgaggatgccgagctcaac
tggagccgcgccgccctgctgaccggccgcgtcgaggtctcgcagatcaccgcgcagcgg
ctcgaggtcgcgcgcctgcccgcaggcggcagcgacgcccccgcccccgaggccagcggc
ggcagcttctcgctgcccgacctgcccgtgtcggtgaacatcggcgagatgtcgatcgag
cgcgtcgagctgggcgaaccgatcctcggcgaggccgtagctcttggggttgccgggtcg
gcccagcttgccgacggcgaaggcgaggcccagctttcggtgcaacggctcgacgggcca
cgtgacgccatcaccttcgacggcagttacgtcaacgaaagccggcagctcgccatcgac
ctcgcggtcgacggcgcgcaggacgggctggtgacgaagctcgccaacctgcccggcgcc
ccggcgctcaagctgacggtgaacggcgagggcccggtcgacgatttcaccgccgacgtg
gccctcgccaccgacggcgaagaccgcttctcgggcacggtgacgctcgagggcgtggcc
gacgaaggccagcgtttcgccgccgatctgtccggtgacctgcgcccgctcctgcccgag
gaccagcgtgcctttctcggcgcgagccagagcatcgagacccgcgggatgatcgaaaac
ggcggcgccatccagcttgacgcgctggacctggagaccgccacggtctcgctcgacggc
tcggcgcgcatcggcgcggacggctggcccgagcgcctcctgctcgacggccgcatcgcc
tcggaggatggcgagccggtgcagatcgccttcacgcaggacgtcacgcgcctcgaccag
gcgacgctgaggctgttctacgaccgggcccagggcgacgaattcaccctgcgggcgctg
gtcgaggggctcgaccgccccgagatggcactggagcgggcgacgctctcgggccaggga
accatcgcgcgcaacgccggcagctcggtgcccgggcaggtctcgggacagctgagcctc
gcgctcgaagggctggaccttgccgatgcgtcgctcgccgacgccaccggccgcgacctc
agaggcgggctgcaattcgactggcaggagggtgcgcccttcgagatcaccggcatcgac
ctgaacggcgccgggatcgaggtcgccggcgacgtcaccctcttcggcctgagcgagggc
aacgacccaacggtcgagccctatatcagcgtgcgcaccgacgacctgtcgcgcttctcg
ggcgtggcgggccgtgacctcggcggggctgccaacttcgtgctcgagggcacgatggag
cccgtcgccggacgcttcgacctgtccctgagcggcaccgccgacgacctttcggcggac
atcgagcagctcgacgggctgctggcgggccggctgacgcttgccgcgagcgccgagcgc
aacgagggcggcaccttcctgcgccagctcgatctggatggccggtcgatcaccctgtcg
gccaacggccagctcaagaccggcgagagctcgggcaccttcgacctgacgctgccggac
ctgtcgctggtcgatccgaacgcctcgggacagctgacggcgtccggcacgctcgacgag
ggcgaggccgcctatgcgctcgacctcgaggccagcggtcccggcgacacccgcatcgac
ggcgttgtcaccgcccgcaagggcgaggatggcggcatcgtcggggtcggcttcgacggc
acggcggattcgcaacggctcgccgccttcgcgcctcttatcgaccggccgctcgccggt
gggctgaccttcgacggctccggcagctacaccctggagaccggctatttcgacacctcc
ggcacgctcgtgacgcaggatctcgagatcggcattccgcaggtcgacgggcttctgcag
ggcaccacccgcgccgaggtcgacgcggtgcgcgacgacggcggcatcaccatccgcgac
gcgcgcgtcaacggccccggcatccgaatgaccgccaacggcacgctgctgtcggatgcc
agcaccgcgaccttcgacatcaccctgccggaactgtcgcgcgcggccgccgggatgacc
ggctcggccagcctgcagggcgagctgaccgaaagcgccgacgcctacctgctcgatttc
tccgccagcggaccgggacagaccggcgcctcgggcgagctcaccgccaccaagagcgat
gacggcagcggcccgatgggcgtggcctccgtaagcttcgacggcaccgccgaggcaggt
gcgctgtcggccttcgccccgctcgtcgggcgcaccctgcgcggctcgctcgatttcgac
ggcggcggttcctacacgctagaaagcagcgccttctcggccgaaggccggctgaccacg
caggacatcgcgcttggcattccaacggtcgaccagctcatcggcggcaccgggcgggcg
gtggtctcggcccggcgcgatgccgacggcacgatcaccgtcgacacgctcgacgtgacc
acctcgcagatcagcgccaccatgagcggcagcctcggccagtccggcaacagcgcgctc
agctacgacgtggtgctcaacaacctcggcgtgatcgtcgagcagcttccgggccgcgcc
accgccaccggcacgctgagcggcagcggctccgggccgtggcaggtcaacaccgacctc
accgcgccgggcggcacgcaggcgcgcgtgaccggcagcattgcgcagagcttcgacaat
gcgaacctcggcatcactggcagcgctccgctgtcgctggccaatacgttcatcgagccg
aacctgctgtcgggtctcgccaggctcgacctgcggctcgacgggccgctcgcacccgcg
tcgctttcgggcacgatccgcgtcgacggcgccgaggcggtgctgcccggaccggcgctc
agcctgaccgggctcgacatcgagacccggctgggcggtgggcaggcgcaggtgtcggtc
accggcggcctctcgaccggcggcacgctcgagaccacgggcaccatcggcatgaccgcg
ccctaccgggccgatcttgccgtgcggctgcgcgatctcctgctcgaggatcgccggctc
taccaggcgcgtgcagatgggcggatcaccgtcgagggcccgctcctgaccggccccgcc
atcggcggatgggtcgagatcaacgaggccgagctgcgcattcccgaaaccggcatgggc
ccgggcagccgcagcttcacgctcaaccacgtcgccgaaccctcggacgtgcgcgccacc
cgcgcccgcgccgggctgctcgaacagtctggcgatggcggcggtggctcggcctacagc
ctgccgctcgacctcgagatccgcgcgccggcccgcatcttcgtgcggggccgtggcctc
gatgccgagctgggcggcacgctgcgcctgcgcggcacctcgcaggatatcgtgcccgag
gggcgcttcgacctgatccgcggccggctggacatcctcggccagcgcctcacgctcgaa
cgggcggtgctgcggctgaccggagacttcattcccaccatcgaggtcgaggccgtgacc
gagcgtgacggcaacaccatcaccgtcgccatcgagggcgaggcgacctcccccgaggta
agcttctcctcgacaccgtcgcggccagaggaagaagtgctcgcgctgctgctcttcggg
cgcaacgtgggcgagctgtcggccttccaggcgctgcgcatcgcggcggcggtcaacacg
ctcgccgggcgcggcggcgagggcatcatcggcaacctgcggcagggcttcggactggat
gatttcgacgtcaccacggatgcggagggcaacgccggcctgcgggcgggcaagtatctg
tccgagaacatctacacggacgtcgaggtcgacagcagcggcgagacctcgatcgacctg
aacctccaggtgaacaagaacgtcaaggcgcggggccgcgcaaccagcgcgggcgacacc
agcctcgggatcttctacgaaaaggattactga
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