Salipiger profundus: Ga0080559_TMP2993
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Entry
Ga0080559_TMP2993 CDS
T04656
Name
(GenBank) DNA polymerase-3 subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
tpro
Salipiger profundus
Pathway
tpro03030
DNA replication
tpro03430
Mismatch repair
tpro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ga0080559_TMP2993
03430 Mismatch repair
Ga0080559_TMP2993
03440 Homologous recombination
Ga0080559_TMP2993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpro03032
]
Ga0080559_TMP2993
03400 DNA repair and recombination proteins [BR:
tpro03400
]
Ga0080559_TMP2993
Enzymes [BR:
tpro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ga0080559_TMP2993
DNA replication proteins [BR:
tpro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ga0080559_TMP2993
DNA repair and recombination proteins [BR:
tpro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ga0080559_TMP2993
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_30
AAA_5
RuvB_N
AAA_22
TacA1
AAA_14
AAA_19
AAA_18
AAA_16
AAA_assoc_2
DUF815
Rad17
AAA_24
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
APX23789
UniProt:
A0A1U7D6M4
LinkDB
All DBs
Position
complement(2550415..2552178)
Genome browser
AA seq
587 aa
AA seq
DB search
MTDSPKYQVLARKYRPETFADLVGQDAMVRTLKNAFKAGRIAQAFIMTGIRGTGKTTTAR
IIAKGMNCIGPDGEGGPTTEPCGECEHCRAIMDGRHVDVMEMDAASNTGVGDIREIIDSV
HYRAASARYKIYIIDEVHMLSTSAFNALLKTLEEPPAHVKFIFATTEIRKVPVTVLSRCQ
RFDLRRIEPEVMIGLLKRIAGTENAQITDDALALITRAAEGSARDATSLLDQAISHGAGE
TTAEQVRAMLGLADRQRVMDLFETIMRGDAPGALTELSAQYADGADPLAVLCDLAELTHW
VSVVKITPEAAEDPTISPDERARGQTLAETLGMRALTRMWQMLLKALDEVAQAPNAMMAA
EMAVIRLTHVSELPSPEELIRKLQDTPPPPAPGPNGGGGGYAQAPGGGNAQATGQPQPTH
PGPSGPVATQGNAVRAVAAENALARFPTFEHAVELIRANRDMTLLVEVERGVRLAAYQPG
RIEFTPAEGARADLAQRLGSALQRWTGNRWGVSVVNGCDAPTIYEKNNAAELALKAEASE
HPLVRAALEAFPKAKILEIRTAEEVAQEASAEALPEVEDEWDPFEED
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacagccccaagtaccaggttctcgcccgcaagtaccgacccgagaccttcgcc
gatctcgtcgggcaggatgccatggtgcgcaccctcaagaacgccttcaaggccgggcgc
atcgcgcaggccttcatcatgacgggcatccggggcaccgggaagaccaccaccgcgcgg
atcatcgccaagggcatgaactgcatcgggcccgacggcgagggcgggcccacgacggaa
ccctgcggcgaatgcgagcactgccgcgcgatcatggacgggcgccacgtcgacgtgatg
gaaatggacgccgcgtcgaacaccggcgtcggcgacatccgcgagatcatcgacagcgtg
cactaccgggcggccagcgcgcgctacaagatctacatcatcgacgaggtgcacatgctg
tccacctcggccttcaacgcgctgctcaagacgctcgaggagccgcctgcgcacgtcaag
ttcatcttcgccaccaccgagatccgcaaggtgccggtaacggtgctgtcgcgctgccag
cgcttcgacctgcgccggatcgaacccgaggtgatgatcggcctgctcaagcgcatcgcc
ggcaccgagaacgcgcagatcaccgacgacgctctggcgctcatcactcgcgccgccgag
ggatctgcccgcgacgcgacctcgctgctcgaccaggcgatcagccacggcgccggcgag
accaccgccgagcaggtgcgcgccatgctcgggctcgccgaccggcagcgggtcatggac
ctcttcgagacgatcatgcgcggcgatgcgcccggcgcgctgaccgagctgtcggcgcaa
tatgccgacggggccgacccgctggcggtgctgtgcgaccttgccgagctcacccattgg
gtctcggtggtcaagatcacccccgaggccgccgaggatccgacgatctcgcccgacgaa
cgtgcccgcggccagacccttgccgagaccctcgggatgcgggcgctgacgcggatgtgg
cagatgctgctcaaggcgctcgacgaggtggcgcaggcgccgaacgcgatgatggccgcc
gagatggcggtgatccggctcacccatgtctccgagctgccctcgcccgaggagctgatc
cgaaagctgcaggacacgccgccgccgcccgctccgggcccgaacggcggtggcggcggc
tatgcgcaagcccccggcggcggcaacgcgcaggcgaccggccagccgcagcccacgcat
cccggcccgtccggccccgttgccacgcagggcaacgcggtgcgggcggtagctgccgag
aacgcgctggcgcgtttccccaccttcgagcacgcggtcgagctgatccgcgccaaccgc
gacatgactctcctggtcgaggtcgagcgcggcgtgcgcctcgcggcctaccagccgggc
cggatcgagttcacgcctgccgagggcgcccgggccgacctggcccagcgcctcggcagc
gccctgcaacgctggaccggcaaccgctggggcgtctcggtggtgaacggctgcgacgcg
ccgacgatctacgagaagaacaacgccgccgagcttgccctgaaggccgaggcctccgag
catccgcttgtcagggccgcgctcgaggcctttccgaaggcgaagattctcgagatccgc
accgccgaggaggttgcgcaggaagccagcgccgaagccctgcccgaggtcgaggacgag
tgggatcccttcgaggaagactga
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