Salipiger profundus: Ga0080559_TMP3008
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Entry
Ga0080559_TMP3008 CDS
T04656
Name
(GenBank) ribulose 1,5-bisphosphate carboxylase small subunit
KO
K01602
ribulose-bisphosphate carboxylase small chain [EC:
4.1.1.39
]
Organism
tpro
Salipiger profundus
Pathway
tpro00630
Glyoxylate and dicarboxylate metabolism
tpro00710
Carbon fixation by Calvin cycle
tpro01100
Metabolic pathways
tpro01110
Biosynthesis of secondary metabolites
tpro01120
Microbial metabolism in diverse environments
tpro01200
Carbon metabolism
Module
tpro_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Ga0080559_TMP3008
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
Ga0080559_TMP3008
Enzymes [BR:
tpro01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
Ga0080559_TMP3008
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_small
Mononeg_RNA_pol
Motif
Other DBs
NCBI-ProteinID:
APX23804
UniProt:
A0A1U7D6L5
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All DBs
Position
complement(2565136..2565555)
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AA seq
139 aa
AA seq
DB search
MRLRQGQFSFLPDLTDDDIRTQAQYAIDQGWAVSVEYTDDPHPRNSYWEMWGHPMFDNRD
AAAVVFEVNECRKEHGSKYIRVLAFDATAGWESIRMSFIVNRPAEEPGFRVVRQEAEGRS
IRYTIESYAMREPEGARYA
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgagacagggccagttcagctttcttcccgacctcaccgacgacgacatccgc
acccaggcgcaatacgccatcgaccagggctgggcggtgtcggtcgaatacaccgacgat
ccgcacccccggaacagctactgggagatgtggggccacccgatgttcgacaaccgcgac
gccgccgccgtggtcttcgaggtgaacgagtgccgcaaggagcacggctcgaaatacatc
cgggtgcttgccttcgacgccaccgccggatgggaatcgatccgcatgagcttcatcgtc
aaccgccccgccgaggagccgggcttccgcgtggtacggcaggaggccgagggacgctcg
atccgctacaccatcgagagctacgccatgcgcgagccagagggcgcacgctacgcctga
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