Salipiger profundus: Ga0080559_TMP3009
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Entry
Ga0080559_TMP3009 CDS
T04656
Name
(GenBank) ribulose 1,5-bisphosphate carboxylase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
tpro
Salipiger profundus
Pathway
tpro00630
Glyoxylate and dicarboxylate metabolism
tpro00710
Carbon fixation by Calvin cycle
tpro01100
Metabolic pathways
tpro01110
Biosynthesis of secondary metabolites
tpro01120
Microbial metabolism in diverse environments
tpro01200
Carbon metabolism
Module
tpro_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Ga0080559_TMP3009
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
Ga0080559_TMP3009
Enzymes [BR:
tpro01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
Ga0080559_TMP3009
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Cas_Csx9
Motif
Other DBs
NCBI-ProteinID:
APX23805
UniProt:
A0A1U7D6V9
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All DBs
Position
complement(2565622..2567085)
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AA seq
487 aa
AA seq
DB search
MLDNAKTVTDAKKRYSAGVMKYAQMGYWEPDYTPKDTDIIALFRITPQDGVDEVEAAAAV
AGESSTATWTVVWTDRLTACDKYRAKAYRVDPVPNSPGEFFAYIAYDLDLFEPGSIANLT
ASIIGNVFGFKPLKALRLEDMRLPVAYVKTFQGPATGIVVERERLNAYGRPLLGATVKPK
LGLSGRNYGRVVYEALKGGLDFTKDDENINSQPFMHWRDRFLYCMEAVNRASAATGEVKG
TYLNVTAGTMEEMYARAEFAKSLGSVIIMIDLVIGYTAIQSMAKWARDNDMILHLHRAGH
STYTRQRSHGVSFRVIAKWMRLAGVDHLHAGTVVGKLEGDPATTKGYYDIFREEYNPMAL
ENGVFFDQDWASLNKMMPVASGGIHAGQMHQLLTYLGEDVVLQFGGGTIGHPHGIAAGAT
ANRVALEAMVFARNAGRDIWNEGEDILRDAARTCTPLKQALDTWKDVTFDYASTDAPDFA
PTPEVSA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgctggacaacgcaaagaccgttaccgacgccaagaagcgctacagcgcgggcgtgatg
aaatatgcccagatgggctactgggagccggactacacccccaaggacaccgacatcatc
gcgctcttccgcatcaccccgcaggatggcgtggacgaggtggaagcggcggcggccgtc
gcgggcgagtcctccacggcgacctggacggtggtatggaccgaccgtctgaccgcctgc
gacaagtaccgcgccaaggcctaccgcgtggacccggtgcccaacagccccggcgagttc
ttcgcctacatcgcctatgatctcgacctgttcgagccgggctcgatcgccaacctgacg
gcctcgatcatcggcaacgtcttcggcttcaagccgctgaaggccctgcggctcgaggac
atgcgcctgcccgtggcctacgtgaagaccttccaggggccggcgacgggcatcgtggtg
gaacgcgagcggctcaacgcctatggtcgcccgctgctgggcgccacggtgaagccgaag
ctggggctttcgggccgcaactacggccgcgtggtctacgaggcgctgaagggcgggctc
gacttcaccaaggacgacgagaacatcaactcgcagcccttcatgcactggcgcgaccgg
ttcctctactgcatggaagcggtgaaccgcgcctcggctgcgaccggcgaggtgaagggg
acctatctcaacgtcacagccggcacgatggaggagatgtatgcccgcgccgagttcgcc
aagtcgctcggctcggtcatcatcatgatcgacctcgtcatcggctacacggcgatccag
tcgatggcgaaatgggcgcgggacaacgacatgatcctgcacctgcaccgcgcggggcat
tcgacctacacccgccagcgcagccatggtgtcagcttccgcgtcatcgccaagtggatg
cgcctcgccggcgtcgaccacctgcacgcgggcacggtcgtgggcaagctcgagggcgac
ccggccaccaccaagggctactacgacatcttccgcgaggaatataacccgatggcgctg
gagaacggcgtgttcttcgaccaggactgggcctcgctgaacaagatgatgccggtggcc
tcgggcggcatccatgccggccagatgcaccagctgctcacctacctcggcgaagacgtg
gtgctgcagttcggcggcggcaccatcggccacccgcacggcatcgcggcgggggcgacg
gcgaaccgcgtggcgctcgaggcgatggtctttgcccgcaacgccggccgcgacatctgg
aacgagggcgaggacatcctgcgcgatgccgcccgcacctgcacgccgctgaagcaggcg
ctggacacgtggaaggacgtgaccttcgactacgcctcgaccgacgcgcccgacttcgcg
ccgacgcccgaagtgtccgcctga
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