Salipiger profundus: Ga0080559_TMP3108
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Entry
Ga0080559_TMP3108 CDS
T04656
Name
(GenBank) type IV secretion system protein VirD4
Organism
tpro
Salipiger profundus
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
APX23904
UniProt:
A0A1U7D6W4
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Position
2671948..2673933
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AA seq
661 aa
AA seq
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MSATKILWGQISIVFLIILATTWGATQYVAASLGYQAQLGPPWFLLFGTPIYYPPAIFWW
WYFYEAYAPPVFAKGGIIAASGGFIAIGVAIAMSVWRAREARNVATYGSARWAEKGEVKA
AGLLDPDGVVLGRYEREYLRHDGPEHVLCFAPTRSGKGVGLVVPSLLTWPGSAIVHDIKG
ENWQLTAGFRARHGRVLLFDPTNPNSSAYNPLLEVRRGEWEVRDVQNIADVLVDPEGSLE
RRNHWEKTSHSLLVGAILHVLYAEKDKTLAGVANFLSDPRRPVESTLRAMMRTSHLGGAG
PHPVVASAARELLNKSENERSGVLSTAMSFLGLYRDPVVGQVTRRCDWRIGDIVGGARPV
TLYLVVPPSDINRTKPLIRLILNQVGRRLTEDLQGKDDRHRLLLMLDEFPALGRLDFFES
ALAFMAGYGLKSFLIAQSLNQIEKAYGPNNSILDNCHVRVSFATNDERTAKRVSDALGTA
TEMKAMKNYAGHRLAPWLSHLMVSRSETARALLTPGEIMQLPPSDEIVMVAGTPPIRATK
ARYYEDARFTERVLPPPDLVDVGASGKDDWSCLAVPKQNDELEPVSETGSEDEDPTASER
RLQPELAQPQPVDRQTPLENEFEFDPPDDEEDGAIRNRRILQQMRGVARQVSLNPDDGME
L
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgaccaagatcctctggggccagatctccatcgtcttcctcatcattctggcc
accacctggggagcgacgcaatacgtggccgcgagcctcggctatcaggcacagctgggc
ccgccctggttcctgctgttcgggacgcccatctactatccaccggccatcttctggtgg
tggtatttctacgaggcctacgcgccaccggtctttgcgaaaggtgggatcatcgccgcc
tccgggggcttcatcgccatcggtgtggccatcgccatgtcggtctggcgcgcgcgcgag
gcccgcaacgtcgcgacctatggatctgcccgatgggccgagaagggcgaggtgaaggcg
gccggacttctcgacccggatggcgtggtcctcggtcgctatgagcgggaatatctgcgc
cacgatgggccggagcatgtgctctgcttcgcgccgacgcgatccggcaaaggggtaggg
ctcgtcgtaccctctcttctcacctggcccggctcggccatcgttcatgacatcaagggc
gagaactggcagttgaccgccgggttccgcgcccggcacggtcgggtcttgctcttcgat
ccgaccaatccgaactcttcggcctacaaccccctgctggaagtgcgccggggggagtgg
gaggttcgcgatgtccagaacatcgccgacgtcctcgtcgaccccgaggggagcctggag
cggcggaatcactgggagaagaccagccacagcctgctcgtcggggcgatcctgcacgtc
ctctatgccgagaaggacaagacgctggccggtgtcgctaacttcctgtccgacccgcgg
cgtcccgtggagtccacactccgcgcgatgatgcggacgtcacatctgggcggggcgggg
ccgcatcccgtggtcgccagtgccgcccgcgaattgctcaacaaatccgagaatgaacgc
tcgggtgtgctgtcgacggcgatgtctttccttggcctctatcgcgaccctgtcgtcggc
caggtcacgcgccgctgcgactggcggatcggcgacattgtcgggggagcgcgacctgtc
acgctgtatctcgtggtgccgccatctgacatcaatcgcaccaagccgctcatccgcctg
atcctcaaccaggtcggccgacgcctgaccgaagacctgcagggcaaggatgaccggcat
cggctgcttctgatgctcgatgagttcccagctcttggccggctcgacttcttcgagagc
gcgctggccttcatggcgggctacgggctgaagagcttccttatcgcccagtcgctgaac
cagatcgagaaggcttacggcccgaataattcgatcctcgacaattgccacgtccgggtg
agcttcgcgaccaatgatgagcgcacggccaagcgggtgtccgacgctctcggcaccgct
accgagatgaaggcgatgaagaactatgccggtcaccgtctggcgccctggctcagccat
ctcatggtgtcccgatcggaaactgcgcgggccttgctcacgcccggagaaataatgcag
cttccgccatccgatgagatcgtgatggtggccggcacaccgccgatccgggcgacgaaa
gcacggtattacgaagatgcgcggttcaccgagcgggtcttgccgccacccgacctggtg
gatgtcggcgcgtccgggaaggatgactggagctgtctggcagtcccaaagcagaacgac
gagctcgagccagtctccgagacgggatcggaggatgaggacccgacagcgtcggaacgc
cgtcttcagccggagctggcgcagcctcagccggtcgacaggcagacacctctcgagaac
gagtttgaattcgacccacccgacgatgaagaggatggcgccatccgcaatcgccgcatc
ctgcagcagatgcgcggtgtcgcgcggcaggtctccctcaatcccgatgacggcatggag
ctttga
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