Salipiger profundus: Ga0080559_TMP3227
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Entry
Ga0080559_TMP3227 CDS
T04656
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
tpro
Salipiger profundus
Pathway
tpro03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ga0080559_TMP3227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpro03400
]
Ga0080559_TMP3227
DNA repair and recombination proteins [BR:
tpro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ga0080559_TMP3227
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Ga0080559_TMP3227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
DUF87
Kinesin
UB2H
AAA
eIF3_p135
AAA_16
Epimerase
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
APX24023
UniProt:
A0A1U7D7C6
LinkDB
All DBs
Position
complement(2793068..2795266)
Genome browser
AA seq
732 aa
AA seq
DB search
MPYAHSDKSQPVLHAPAPDVREREKLEGGKRFVMHTEFNAAGDQPAAIAELSSGITGGER
NQVLLGATGTGKTFTMAKVIEETQRPAIILAPNKTLAAQLYGEFKHFFPDNSVEYFVSYY
DYYQPEAYVPRSDTFIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVET
YGAMTQDLHAGKEYEMRKVMADLVAQQYRRNDAGFQRGSFRVRGDSLEIWPAHLEDRAWR
LSFFGEELESIDEFDPLTGQKTGSFDRIRVYANSHYVTPKPTMNQAVINIKKELRQRLDQ
LVSEGKLLEAQRLEQRTNFDIEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDNA
IVFADESHVSVPQIGGMYRGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSIFVS
ATPANWELEEAGGVFTEQVIRPTGLLDPQVEIRPVEMQVDDLLDEIRKVSADGYRTLCTV
LTKRMAEDLTEYLHEQGIKVRYMHSDIDTIERIEILRDLRLGAFDVLIGINLLREGLDIP
ECGLVAILDADKEGFLRSETSLIQTIGRAARNAGGRVIMYADRITGSMERAMAETERRRE
KQIAYNEAHGITPSTIKKNVEDILAGLYQGDVDMNRVTATIDEQHQGSNMQAVLEGLRTD
MRKAAENLEFEEAARLRDEVKRLEAVDLAVADDPLARQQAVEKASEAAVKASGRSTAGRP
GQRGGNVKRRKK
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgccatacgcccattccgacaagtcccagcccgtgctgcacgcccccgcgcccgacgtg
cgcgagcgcgagaagctcgagggcggcaagcgcttcgtgatgcacaccgagttcaacgcg
gccggtgaccagcccgccgccatcgccgagctgtcctcggggatcaccggcggcgagcgc
aaccaggtgctgctgggggcgacgggcaccggcaagaccttcaccatggcaaaggtgatc
gaggaaacccagcgcccggcgatcatcctcgctccgaacaagacgctggcggcgcagctc
tacggggagttcaagcacttcttccccgacaactcggtcgagtatttcgtctcctactac
gactactaccagcccgaggcctacgtgccgcgcagcgacaccttcatcgagaaggaaagc
cagatcaacgagcagatcgaccggatgcgccactcggccacccgcgcgctgctcgaacgc
gacgacgtgatcatcgtggcctcggtgtcctgcatctacggcatcggctcggtcgaaacc
tacggcgccatgacccaggatctgcacgccggcaaggaatacgagatgcgcaaggtcatg
gccgacctcgtggcacagcagtatcgccgcaacgacgcgggcttccagcgcggcagcttc
cgggtgcgcggcgacagcctcgagatctggcccgcgcacctcgaggaccgggcgtggcgg
ctttcgttcttcggcgaagagctcgagagtatcgacgagttcgatccgctcaccgggcag
aagaccggcagtttcgaccgcatccgcgtctacgcgaactcgcactacgtgacaccgaag
ccgacgatgaatcaggcggtgatcaacatcaagaaggagctgcgccagcggcttgaccag
ctggtgagcgagggcaagctgctcgaggcacagcggctcgaacagcgcaccaacttcgac
atcgagatgctcgaggccaccggcgtctgcaacggcatcgagaactactcgcgctacctg
acgggccgcgcgccgggcgagccgccccccacgctgttcgagttcattcccgacaacgcc
atcgtcttcgccgacgagagccacgtcagcgtgccgcagatcggcggcatgtaccggggc
gactaccggcgcaagttcacgctggccgagcacggcttccgcctgccctcctgcatggac
aaccgccccctcaagttcgaggaatgggacgcgatgcgcccgcagtcgatcttcgtctcg
gcgacgcccgccaactgggaactcgaggaggccggcggcgtcttcaccgaacaggtcatc
cggcccaccgggctgctcgacccacaggtcgagatccggcccgtggagatgcaggtcgac
gacctgctcgacgagatccgcaaggtctcggccgatggctatcgcacgctctgcacggtg
ctgaccaagcgcatggccgaggatctgaccgagtacctgcacgagcagggcatcaaggtc
cgctacatgcactccgacatcgacaccatcgagcggatcgagatcctgcgcgacctgcgg
ctcggggccttcgacgtgctgatcggcatcaacctgctgcgcgagggtctcgacatcccc
gagtgcgggctggtggccattctagacgccgacaaggagggcttcctgcgctccgagacc
tcgctgatccagaccatcgggcgtgctgcgcggaacgccgggggccgggtcatcatgtat
gcggaccgcatcaccggctcgatggaacgcgccatggccgagaccgagcggcgccgcgag
aagcagatcgcctacaacgaggcacacggcatcacgccctcgacgatcaagaagaacgtc
gaggacatcctcgccgggctctaccagggcgacgtggacatgaaccgcgtcaccgccacc
atcgacgagcagcaccagggttcgaacatgcaggcggtgctcgaggggctgcggaccgac
atgcgcaaggcggctgagaacctcgagttcgaggaagccgcccgcctgcgcgacgaggtc
aagcggctcgaggcggtggacctcgcggtggccgacgacccgctggcacgccagcaggcg
gtcgagaaggcgtcggaagcggcggtcaaggcctcgggccgctccaccgccggccgcccg
ggccagcgcggcggcaacgtgaagcgacggaagaagtag
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integrated database retrieval system
