Salipiger profundus: Ga0080559_TMP397
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Entry
Ga0080559_TMP397 CDS
T04656
Name
(GenBank) transcriptional activator of acetoin/glycerol metabolism
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
tpro
Salipiger profundus
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpro03000
]
Ga0080559_TMP397
Transcription factors [BR:
tpro03000
]
Prokaryotic type
Helix-turn-helix
Other families
Ga0080559_TMP397
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_lid_14
AAA_16
HTH_30
HTH_50
TsaE
AAA
AAA_22
HTH_21
nSTAND3
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
APX25880
UniProt:
A0A1U7DCT9
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Position
pTPRO1:141358..143109
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AA seq
583 aa
AA seq
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MTLHGHVREIEQALEGRATGRDAQVTDSWRRCVELYKMDPARADPAHIVTEPELRQHRKQ
AEWMISAARSGLQNLFRQVAGQNYVLLLANAEGVCVDFFGDPSFESELRQSGLYLGADWS
EELAGTCGVGACLVSGEPITIHQDDHFGNAHTGLSCTAAPIYDSLGHLAAVLDISLLRSP
SPKRSQNLAMSLVTTSARRVEMANLMAESRREWVLRLSSSPEFLDVDPEAAVSLDGAGRV
IGFTRAAQRLLGGDVPLLGTPVDELLHMSVDDLPDLMRDRPTEDRLVHLRDGGALFGHAI
SPQAPRTRPSAPALQARSSAVQGLAGPDPAMSQLLARAEKLAPTGVPLLISGEMGTGKTR
LARAIHLAGKAEALLQIDCAALGVEDLRARLGGCAASGTLLLRRIEDLPEDSRRVLVAEL
DARRQLRVIATTTADLSAAVGQGAFPATLYHRVSGAQLALPPLRQRQDLGWMIERMLRRR
APEGVRLTPSARVELLGRFWTGNLRELEQVLDVAVALAEGDVIDAPDLPPAPDAPKADAA
PEESLEQVLESCHWNMALAARRLGVNRSTVLRRMRKAGLRAPG
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcttcacggccatgtcagggaaatcgagcaggccctcgagggccgggccaccggg
cgcgatgcgcaggtgacggactcgtggcgccggtgtgtcgagctctacaagatggaccct
gcgcgcgccgatcccgcccacatcgtgaccgagccggaactgcgccagcaccgcaagcag
gccgagtggatgatctcggcggcgcgctcggggttgcagaacctctttcggcaggtcgcc
ggtcagaactacgtgcttctgctcgccaacgccgagggggtctgcgtcgacttcttcggt
gacccgtcgttcgagtccgagctgcggcagtccgggctctacctcggagccgactggtcc
gaggaactggcgggcacctgcggcgtcggcgcgtgtctggtctcgggcgagccgatcacc
atccaccaggacgaccatttcggcaacgcccacaccggactgtcatgcaccgccgcgccg
atctacgacagcctcggtcaccttgccgccgtgctcgacatctcgctgctgcgcagcccc
tcgccgaagcgcagccagaacctcgcgatgagccttgtcaccacgtcggcccggcgggtc
gagatggccaacctgatggccgagagccgcagggaatgggtgctgcggctgtcgtcctcg
cccgaattcctcgacgtcgaccccgaggccgcggtctcgcttgacggcgcggggcgggtc
atcggcttcacccgcgccgcgcagcgcctgctggggggcgatgtcccgctgctcggcacc
ccggtcgacgagctcctgcacatgtcggtggacgatcttcccgacctcatgcgcgaccgc
ccgaccgaggatcggctcgtgcacctgcgggatggcggcgcgctcttcggtcacgcgatc
tcgccgcaggcgccgcgcacccgcccgagtgcccccgcgctgcaggcccgttccagcgcg
gtgcaggggctcgccgggcccgacccggcgatgtcgcagcttctggcgcgcgccgagaag
ctcgcgccgaccggggtgccgctgctgatctcgggcgagatgggcaccggcaagacccgc
cttgcgcgggcgatccacctggcgggcaaggccgaggcgctgttgcagatcgactgcgcc
gcgctcggcgtggaggatctgcgcgcacggcttggcggctgcgcggcgtcgggcacgctg
ctgctgcggcggatcgaggacctgcccgaggacagccgcagggttctggtggccgagctc
gacgcgcgccgccagctgcgggtgatcgccacgacgacggcggacctgtcggcggcggtg
gggcagggggcctttccggcgacgctctatcaccgggtctcgggggcgcagcttgcgctg
ccgccgctgcgccagcgacaggacctcggctggatgatcgaacggatgctgcggcggcgt
gcgcccgagggcgtgcggctcacgccctcggcgcgggtcgagctgctggggcggttctgg
accggcaacctgcgcgagctcgaacaggtgctcgacgtcgccgtcgcgcttgccgagggt
gacgtgatcgacgcacccgacctgccgcccgcccccgacgccccgaaagcggacgcggcg
cccgaagagagcctcgagcaggtgctggaatcgtgccactggaacatggcgcttgccgcg
cggcggctcggggtgaatcgctcgacggtcctgcggcggatgcgcaaggccgggttgcgc
gcccccggctga
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