Salipiger profundus: Ga0080559_TMP42
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Entry
Ga0080559_TMP42 CDS
T04656
Name
(GenBank) Exodeoxyribonuclease I subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
tpro
Salipiger profundus
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpro03400
]
Ga0080559_TMP42
DNA repair and recombination proteins [BR:
tpro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Ga0080559_TMP42
Archaeal homologous recombinant proteins
Ga0080559_TMP42
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
APX25974
UniProt:
A0A1U7DCT3
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All DBs
Position
pTPRO2:22245..23387
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AA seq
380 aa
AA seq
DB search
MRILHTADLHLGRQFNGIPLDADHAAILDQIVSAITSRDVDVLVIAGDIFDRAAPPTSAV
RQFNGFLARVASETDAAVVMIAGNHDSGDRIASMAIMTDTRRALIRGAISADEKPLLLTD
AHGPVAFTGLPFAYEYAARECFSDEALHAPEDVLAAQVACGRRNIPDGTRWVVVSHAFVA
GASSSESERPLTRVGGIETVSSAVFEGAHYVALGHLHRPQSVGAPHIRYSGSPLAFGFDE
SDCQKSMSLVEIDAVGQTTIEIIPFTPIRQVRVLKGRHAELLLADRSDDFIKAVLTDDAP
VIDGMKRIRDVFPNACELIYERDEQAQEVKSLTGRALAVANPVEVIGDFVEHVRDEGFSE
KELEVVASALGRLCEAEDVQ
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaggattctccacaccgccgacctccatctcgggcgtcagttcaacgggattcctctt
gatgccgatcacgcagcaattctcgaccagatcgtttcggcgatcacctctcgcgacgtt
gatgttcttgtaattgcaggagatatttttgaccgggctgccccgccgacgtctgccgtg
cgacagttcaatgggttcttggcgcgcgttgcctcagagaccgacgcggccgtggtgatg
atcgccggcaatcacgactctggtgatcgaatcgcatccatggcgatcatgacagacaca
cgacgcgctttgatacgtggggctatcagtgcggacgagaagccgctgttacttacggac
gcccacggacctgtggcgttcacggggttgccgttcgcctacgagtatgccgcccgtgaa
tgtttttccgacgaagctctccacgcgcccgaggacgttctcgccgctcaggtggcttgc
ggtcggcgtaacattcccgatggtacgcgttgggtcgtcgtttcgcatgctttcgtagcc
ggggcttcgagcagcgaaagtgaacgacctctcactagggtcggcggcatcgagaccgtc
agttcggccgtgttcgagggtgcccactatgtggctcttggccatctgcaccggccgcaa
tcggttggtgcccctcatatccggtactcgggatcgccattagctttcgggtttgatgaa
tctgactgccagaagtcgatgagcctcgtcgagatcgatgcagtcgggcaaaccacgatt
gagatcattcctttcacacccattcgccaagtgcgcgtcttgaagggacgtcacgcagaa
cttctcctcgcagatcgatctgacgattttatcaaagccgtgcttaccgatgatgcgcct
gtgatcgatggaatgaagcgcatccgcgacgtgttcccgaacgcctgtgaacttatctac
gagcgggatgaacaggcgcaagaagtaaagtctttaacgggacgtgccctggcggtcgcg
aaccctgtcgaagtcattggcgacttcgttgaacacgtgcgggacgaagggttctcagag
aaggaactggaggtcgtagcgtcggcactcggtcgcctgtgtgaggcggaggatgtccaa
tga
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