Salipiger profundus: Ga0080559_TMP423
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Entry
Ga0080559_TMP423 CDS
T04656
Name
(GenBank) transcriptional regulator, LacI family
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
tpro
Salipiger profundus
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpro03000
]
Ga0080559_TMP423
Transcription factors [BR:
tpro03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Ga0080559_TMP423
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
HTH_3
TetR_N
HTH_10
HTH_IclR
HTH_31
HTH_Tnp_ISL3
HTH_35
HTH_24
Motif
Other DBs
NCBI-ProteinID:
APX25906
UniProt:
A0A1U7DCV8
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All DBs
Position
pTPRO1:172272..173318
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AA seq
348 aa
AA seq
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MDQTEPAKAARKRRKMQRVTMTDVAKHADVSPSTVSLYLRKPEAVSERIGQRVEHAIAEL
GYVPNYVAGGLAAAGSRVVSVIVPSLRNAFFSDTVTELEKLLAESRLQTLVGHTEYSATQ
EEALVRAALSWAPAAVVLTGTAHTQATRDLLRRNGTPVVEMWELTDDPIDQAVGFSHEDV
GRRIARHFIGKGYESAAFLGARMGDDKRAADRARGFEAEMRAYGVPVQVVEDHAPASTGS
AARLLDNLDSPVRAVACSNDTVALGVLFEAQRRGIAVPGELAIAGFGDLEFSAQSVPPLT
TVRPSASEIAARVADCIRARDPLTATSGAGEGPRVFDTGFTFVPRESG
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggaccagacagagcccgcaaaagccgcccgcaagcgccgcaagatgcaacgcgtcacg
atgacggacgtggcgaaacatgcggatgtgtcgccctcgaccgtgtcgctctacctgcgc
aagcccgaggcggtgtccgagcggatcggccagcgggtcgaacacgccatcgccgagctc
ggctacgtgcccaactacgtcgccggcgggctggcggcggcggggtcgcgggtggtcagc
gtcatcgtgccctcgctgcgcaacgcgttcttctccgacaccgtcaccgagctcgagaag
ctgctggccgaaagtcggctgcagaccctcgtcgggcacaccgagtattccgccacgcag
gaagaggccctggtccgcgccgcgctgtcctgggctcctgcggcggtggtgctgaccggc
acggcccacacgcaggccacgcgcgatctgctgcgtcggaacggcacgccggtcgtcgag
atgtgggagctgaccgacgatcccatcgaccaggcggtcggcttcagccacgaggacgtc
ggccgccgcatcgcgcggcatttcatcggcaagggctacgagagtgccgccttcctcggg
gcgcggatgggcgacgacaagcgggccgccgaccgtgcccgcggcttcgaggccgagatg
cgcgcctacggcgttccggtgcaggtggtcgaggatcacgcgccggccagcaccggctct
gcggcacggctgctggacaacctcgacagcccggtccgggccgtggcctgctcgaacgat
acggtggcgctcggggtgctgttcgaggcgcagcgccgtggcatcgcggtgccgggcgag
ctggccatcgcgggcttcggcgatctcgagttctctgcgcagtcggtgccgccgctgacc
accgtgcggccctcggcatcggaaatcgcggcgcgggtggcggactgcatccgggcccgt
gacccgctgaccgccacctccggggcgggcgaagggccgcgagtcttcgataccggcttc
accttcgtcccgcgcgagagcggctga
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