Salipiger profundus: Ga0080559_TMP4275
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Entry
Ga0080559_TMP4275 CDS
T04656
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tpro
Salipiger profundus
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpro03400
]
Ga0080559_TMP4275
Enzymes [BR:
tpro01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Ga0080559_TMP4275
DNA repair and recombination proteins [BR:
tpro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Ga0080559_TMP4275
Prokaryotic type
Ga0080559_TMP4275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
APX25071
UniProt:
A0A1U7DA81
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All DBs
Position
complement(3897777..3899198)
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AA seq
473 aa
AA seq
DB search
MADTSPIIVWIRRDLRLSDHAALHAAGKSGRPVIPVFIRDHTVDDLGAAPKWRLGLGLAV
YAEALAEKGSRLVLRAGPAREVLEALVDETGAGAVWWQRAYDPAAIERDTAVKSALKDRD
IDAQSFAGHLLFEPWTVETKQGGFYKVYSPFWRAVKDTEVPEPLPAPSTLAAPERWPEGD
ALEDWNLGAEMRRGAAVVEPYVQLGEATAQARLGAFTGGKIDAYKDGRNLVSEDGCSNLS
ENLSLGEISPAQCWHAGLRAMEAGKEGAETWVKELVWREFAYHLLWHTPHLPESNWREEW
DAFPWNEDERRREVIAWKHGRTGIPFVDAAQREMYVTGRMHNRARMIVASYLTKHLMCHW
KIGMKWFEDCLIDWDPASNSLGWQWTAGSGPDAAPYFRVFNPITQREKFDPDCAYVNRWI
AEGQSNPPKSALSYFDAIPESWGMTPDDDYPEPVVSPDEGRKAALSAYENRDF
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacatccccgatcattgtctggatccgccgcgacctgcggctgagcgaccat
gccgcactgcacgcggcgggcaagtcggggcggccggtcatcccggtgttcatccgcgac
cacacggtcgatgatctcggggccgcgccgaaatggcggctggggctcgggcttgctgtc
tatgcggaggcgcttgccgagaagggcagccggcttgtgctgcgcgccggacccgcgcgc
gaggtgctcgaggcgcttgtcgacgagaccggcgccggcgcggtctggtggcagcgtgcc
tacgacccggcggccatcgagcgcgacaccgccgtgaagtcggcgctgaaggatcgggac
atcgacgcccagagctttgccggccacctgctgttcgagccgtggacggtcgagaccaag
cagggcggcttctacaaggtctattcgccgttctggcgcgcggtgaaggacaccgaggta
cccgagccgctgccggcgccctcgacgctcgccgcgccggaacgctggcccgagggcgac
gcgctcgaggactggaacctcggcgccgagatgcggcgcggcgcggcggtggtcgagccc
tacgtgcagcttggcgaggccacggcgcaggcgcgcctcggcgccttcaccggcggcaag
atcgacgcctacaaggacggtcgcaacctcgtgtccgaggacggctgctcgaacctttcg
gagaacctcagccttggcgagatcagcccggcgcaatgctggcacgcgggcctgcgcgcg
atggaggcgggcaaggagggcgccgagacctgggtcaaggagcttgtctggcgcgagttc
gcctatcacctgctttggcacacgccgcatctgcccgaaagcaactggcgcgaggaatgg
gacgccttcccctggaacgaggacgagcgtcgtcgcgaggtcatcgcgtggaagcatggc
cgcaccggcattcccttcgtcgatgcggcgcagcgcgagatgtatgtcaccggccggatg
cacaaccgcgcgcgcatgatcgtggcgagctacctgaccaagcacctgatgtgtcactgg
aagatcggcatgaaatggttcgaggactgcctgatcgactgggatccggcctcgaattcg
ctcggatggcagtggacggcgggcagcggtccggatgccgcgccctattttcgggtattc
aacccgatcacccagcgcgagaagttcgaccccgactgcgcctacgtgaaccgctggatc
gccgaggggcagtcgaacccgccgaagagcgcgctcagctacttcgatgcgatccccgaa
agctggggtatgacccccgacgacgactaccccgagccggtggtgagccccgacgaaggc
cgcaaggccgcgctgtcggcctacgagaaccgcgacttctga
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