Salipiger profundus: Ga0080559_TMP5026
Help
Entry
Ga0080559_TMP5026 CDS
T04656
Name
(GenBank) type IV secretion system protein VirD4
Organism
tpro
Salipiger profundus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
APX26095
UniProt:
A0A1U7DDH1
LinkDB
All DBs
Position
pTPRO3:14812..16482
Genome browser
AA seq
556 aa
AA seq
DB search
MRSVMLVFGGLFRFFGRLIFTPILLGWMIGAVLFGAMLGSLVATPFIFTFFDQTPGESGW
QWLVFGPFMLIGAVFGFQYWRMASGADAYFGLTGDSHGSARFANRKELKKLERGKGQEDA
GLLIGRNPHTGRLLRYDGPAHLITLAPTRAGKGVGTVIPNLLAAERSVLVIDPKGENARI
AGEARRRFGTVHVLDPFEVSGHPSAAYNPLDRLTPDGLDLGEDAASLTEALVMDPPGQVT
EAHWNEEAKAILGGLIMFCVCHEDRDRRSLATVREYLTLPPEKLRALLELMQDSDEAGGL
IARAANRFLGKADREAASVLSNAQRHTHFLDSPRIAKCLARSDFAFSDLRHRITSVFLVL
PPNRMDAYSRWLRLLVSQALQDIARDAERPQGASEGRSERLKAPTLFLLDEFAALGRLEA
VERAMGLMAGYGLQLWPILQDMSQLKDLYGERAGTFIANAGVQQVFGVNDFETAKWLSQM
IGQETAGFQTDSFKPGDGPSFSNNLTGRDLLTPDEIMQLPPDRQLLRVQGQATAIAQKLR
YYADPEFAGLFTPEAP
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgcggagcgtgatgctcgtcttcggggggctgttccgcttcttcggtcggttgatcttc
acacccatccttctgggctggatgatcggcgctgtcctgttcggggcgatgctcggctct
ctggtggccacgccgttcatcttcaccttcttcgatcagacgcccggtgaaagcggctgg
caatggctggtctttggtcccttcatgctcataggcgctgtcttcgggtttcagtactgg
cgcatggcctccggagctgatgcctatttcggtctgaccggtgacagccacggctcggca
cggtttgcgaaccgcaaggagctgaagaagctggaacggggcaaagggcaggaagatgcc
gggcttctgatcgggcgcaatccgcacaccgggcggttgctacgctatgacggcccggcc
catctgatcaccctcgccccgacacgggccgggaaaggcgtcggcaccgtgatcccgaac
ctgctggcggcggaacgctcggtgctggtgatcgacccaaagggcgagaatgctcggatc
gcgggcgaggcccggaggcggttcggtacggttcatgtcctcgatccgtttgaggtcagc
ggccacccctccgccgcctacaacccgctcgaccggctgacgccggacggcctcgatctg
ggcgaggatgccgcctccctgaccgaggcgctggtgatggacccgccgggacaggtgacg
gaagcgcactggaacgaggaagctaaagccattctcggcggtctgatcatgttctgcgtc
tgccacgaggaccgcgaccgccggtcccttgccaccgtccgggaatatctcaccctgccc
ccggaaaagctgcgcgcgcttttggagctgatgcaggacagcgacgaggcaggcgggctg
atcgcccgcgccgccaaccgtttcctcggcaaagcggatcgggaagccgcctcggtcctg
tccaacgcgcagcgccacacgcacttcttggattcgccccggatcgcaaagtgcctcgcg
cggtcggactttgccttctccgacctgcggcaccggatcacctccgtctttctggtcctg
ccgcccaaccggatggacgcctacagccgctggctgcgccttctggtctcccaggccctt
caggacatcgcacgggacgctgagcggcctcagggcgcgtcagagggccgttctgaacgc
ctcaaggcccccaccctcttcctcctcgatgaattcgccgccctgggccgtctggaggcc
gtagagcgcgccatggggctgatggcgggatatgggcttcagctctggccgatcctgcag
gacatgagccagctcaaggacctctatggcgagcgcgctggcaccttcattgccaatgcc
ggggtgcaacaggtcttcggggtgaatgacttcgaaaccgcgaaatggctgagccagatg
atcggccaggaaactgccgggttccagaccgacagcttcaagcccggcgatggccccagc
ttctcgaacaacctcacgggacgcgatctgctgacccccgatgaaattatgcagcttccg
ccagaccgccagctcctgcgcgtccaggggcaggccaccgccatcgcccaaaagctgcgc
tactacgctgatcctgaatttgccgggctgttcacgcccgaagccccataa
DBGET
integrated database retrieval system
