Salipiger profundus: Ga0080559_TMP5090
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Entry
Ga0080559_TMP5090 CDS
T04656
Name
(GenBank) LysR family transcriptional regulator, pca operon transcriptional activator
KO
K02623
LysR family transcriptional regulator, pca operon transcriptional activator
Organism
tpro
Salipiger profundus
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpro03000
]
Ga0080559_TMP5090
Transcription factors [BR:
tpro03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Ga0080559_TMP5090
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
DUF5419
Motif
Other DBs
NCBI-ProteinID:
APX26427
UniProt:
A0A1U7DE22
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All DBs
Position
pTPRO7:68275..69192
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AA seq
305 aa
AA seq
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MDIPNGLKLRHLEAFLTVAQAGTISAAARQRNVSQPALSKTISELEGLLGAHLFERTGRR
AVLTPAGENFRAHARAALQSLEAGVRDLSGQVAAGLVKVGLLPTVAGGFFPSVALAFSQA
RPDARIGIITGPNHYLLERLRGGKIDLMVGRMPRAADMAGLSFEYLYDEPILLVARAGHP
ALDLPVTDALLRYPLILPNPGAIIRQSVDQYLAAMGLSDLTPVFETVALPAAQTLLEGSE
MLWFISRGVVAREIARGSLAALDLKSDYMAGAVGLTRKFTFDEDSHADLLARLLHRRVEE
DCARR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggatatacctaatggtctgaaactgcgccatctcgaagctttcctgaccgttgctcaa
gccggaacaatctctgctgcggcgcggcaacggaacgtgtcgcagccggcattgtcaaaa
acgatctcggaactggaggggctgcttggcgcgcatctcttcgagcgtacagggcggcgg
gccgtcttaaccccggcaggtgagaattttcgtgctcatgcccgcgccgcgctgcaaagc
ctcgaggcaggggtgcgcgacctgtcggggcaggtggcggcggggctggtgaaggttggg
ttgctgccgaccgtggccggtgggttcttcccctcggtcgctcttgcattctcgcaggcg
cgcccggatgcgcggatcggtataatcactgggccgaaccactacctgctcgaacgactg
cgcggcggcaagattgaccttatggtcgggcgcatgccacgggcagccgacatggcaggc
ctgtctttcgagtatctctatgacgagccgatcttgctggtggcgcgcgccggacatcca
gcgctggatctgccggtgaccgacgctctgctacgctatcccctcatcctgcccaacccc
ggtgcgatcattcgtcagagcgtggatcaataccttgccgcgatggggttatccgatctc
acaccggtgttcgagacggtggccctgccggcggcgcaaacgcttctcgaaggttctgag
atgctctggttcatctcgcgcggcgtcgtggcgcgggaaattgcgcgcggcagccttgct
gcgctcgatctaaagtcggattacatggccggggcggttggtctgacacgcaagttcacg
ttcgacgaagacagccatgccgatctgctggcgcggcttctgcaccggcgggttgaagag
gattgcgcccgtcgttga
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