Salipiger profundus: Ga0080559_TMP583
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Entry
Ga0080559_TMP583 CDS
T04656
Name
(GenBank) DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tpro
Salipiger profundus
Pathway
tpro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ga0080559_TMP583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpro03400
]
Ga0080559_TMP583
Enzymes [BR:
tpro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Ga0080559_TMP583
DNA repair and recombination proteins [BR:
tpro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Ga0080559_TMP583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
APX21379
UniProt:
A0A1U7CZP4
LinkDB
All DBs
Position
complement(98929..100359)
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AA seq
476 aa
AA seq
DB search
MRVVVLPEIGTWEGWRDEARALLGAGVPPEEVLWQRGGTGAGDLFAEALPPVSGGAATVP
RRFVDLARLAVCHSDPERFARLYALLWALRDDRRLLEDRGDARVDRLTRMAKEVSRDRHK
MTAFVRFREIGAPGAERRAFAAWFEPSHHIVELTAPFFVKRFGDMDWAIFTPDLSAHFEA
GRLRIRAGAARPELPADAAEDLWRTYFRNIFNPARLKTSAMQSEMPKKYWKNMPEASLIP
ELIAGAQARAREMAEAAPTLPPPRAARIADRRAEADATAVTEGGPEALAAALSGCRRCPL
WADATQAVPGEGPPDAALMIVGEQPGDREDLAGRPFVGPAGQLFDAVAGRVGLARERAYV
TNAVKHFKFTPRGKRRIHQRPNAGEVAHCRWWLDLERERVQPKLILALGATAAESLTGDG
RRLGARRGGVETTPDGTPVLITYHPSYLLRLPEAERFAAMAAFEADLGRAVEMVGA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcgtggtgctgccggagatcggcacctgggagggctggcgcgacgaggcgcgc
gcgctgctcggcgccggcgtgccgcccgaggaggtgctctggcaacgcggcggcaccggg
gcgggtgacctcttcgccgaggcactgccgccggtctcgggcggggcggccaccgtgccg
cgccgcttcgtcgatcttgcccggcttgcggtctgccacagcgatcccgagcgcttcgcc
cggctctacgccctgctctgggcgctgcgcgacgatcgccgcctgctcgaggaccggggc
gacgcgcgcgtcgaccggctgacccgcatggccaaggaggtgagccgcgaccgccacaag
atgaccgccttcgtgcgcttccgcgagatcggtgccccgggggcggagcgccgcgccttc
gcggcgtggttcgagccctcgcaccacatcgtagagctgaccgcgccgttcttcgtcaag
cggttcggcgacatggactgggcgatcttcacgccggacctctcggcgcatttcgaggcc
ggccgcctgcgtatccgtgccggggccgcacgccccgagttgcccgcggatgcggccgag
gacctgtggcggacctacttccgcaacatcttcaacccggcgcggctgaagacctcggcg
atgcagtcggagatgccgaagaaatactggaagaacatgcccgaggcgtcgctgatcccg
gagctgatcgccggcgcgcaggcacgcgcccgcgagatggccgaggccgcgccgacgctg
ccgccgccgcgcgccgcccgcatcgccgaccggcgtgccgaggcggacgcgaccgcggtg
accgagggcgggccggaggcactggccgcggcgctctcggggtgccgccgctgcccgctc
tgggcggacgcgacgcaggcggtgccgggcgaggggccgccggatgccgcgctgatgatc
gtgggcgagcagccgggcgaccgcgaggatcttgccgggcggcccttcgtcgggcccgcc
ggccagctcttcgacgcggtggcgggccgcgtcgggctggcgcgcgagcgggcctacgtg
acgaatgcggtcaagcacttcaagttcaccccgcgcggcaagcggcgcatccaccagcgt
ccgaacgccggcgaggtcgcgcattgccgctggtggctcgacctcgagcgcgaacgcgtg
cagccgaagctgatcctcgcgttgggggcgacggcggcggagagcctcaccggtgacggc
cgccggctcggcgcgcgccggggtggggtcgagaccacgccggacggcacgccggtgctg
atcacctatcacccgtcctacctgctgcggctgccggaggccgagcgctttgctgccatg
gcggcgttcgaggcggacctcggacgggcggtggagatggtcggggcgtga
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