Salipiger profundus: Ga0080559_TMP670
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Entry
Ga0080559_TMP670 CDS
T04656
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
tpro
Salipiger profundus
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpro03032
]
Ga0080559_TMP670
03036 Chromosome and associated proteins [BR:
tpro03036
]
Ga0080559_TMP670
03400 DNA repair and recombination proteins [BR:
tpro03400
]
Ga0080559_TMP670
DNA replication proteins [BR:
tpro03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Ga0080559_TMP670
Chromosome and associated proteins [BR:
tpro03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Ga0080559_TMP670
DNA repair and recombination proteins [BR:
tpro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Ga0080559_TMP670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Tim44
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
APX21466
UniProt:
A0A1U7D066
LinkDB
All DBs
Position
complement(183921..184202)
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AA seq
93 aa
AA seq
DB search
MIRSELIQKIAEENPHLYQRDVERIVNTIFEEITNAMARGDRVELRGFGAFSVKKRDART
GRNPRTGEAVEVEEKHVPFFKTGKLLRDRLNGK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgatcagatctgaattgatccagaagatcgcggaggagaatccgcatctctaccagcgg
gacgtggagcggatcgtgaacacgatcttcgaggagatcacgaatgccatggcccggggc
gaccgggtcgagctgcgcgggttcggcgccttctcggtgaagaagcgcgacgcccggacc
gggcgcaacccaaggaccggtgaagcggtcgaggtcgaggaaaagcacgtgccgttcttc
aagacgggcaagcttctccgcgaccggctgaacggaaagtaa
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integrated database retrieval system
