Salipiger profundus: Ga0080559_TMP725
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Entry
Ga0080559_TMP725 CDS
T04656
Name
(GenBank) DNA helicase-2 / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tpro
Salipiger profundus
Pathway
tpro03420
Nucleotide excision repair
tpro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ga0080559_TMP725
03430 Mismatch repair
Ga0080559_TMP725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpro03400
]
Ga0080559_TMP725
Enzymes [BR:
tpro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ga0080559_TMP725
DNA repair and recombination proteins [BR:
tpro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ga0080559_TMP725
MMR (mismatch excision repair)
Other MMR factors
Ga0080559_TMP725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
APX21521
UniProt:
A0A1U7D053
LinkDB
All DBs
Position
complement(234489..236840)
Genome browser
AA seq
783 aa
AA seq
DB search
MSSFDDMDAFEGASLSARAMAARPAPYLDDLNEAQRAAVEQLDGPVLMLAGAGTGKTKAL
TARIVHLLVSGRARPNEILSVTFTNKAAREMKTRVGRMLGQQIEGMPWLGTFHAICVKLL
RRHAELVGLKSNFTILDTDDQLRLLKQLIAANNIDEKRWPARQLLGLIDQWKNRAWVPSK
VPASEASAYNHRGTELYEQYQARLRELNACDFGDLLLHMVTIFQAHPDVLEQYQRWFRYI
LVDEYQDTNVAQYLWLRLLAGGHKNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGAHVV
RLEQNYRSTAHILAAASGVIRGNEGRLGKELWTEAEGGEKVRLIGHWDGEEEARWIGEEI
ESLQKGTRGIDPHSLDDMAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERLEIRDAM
AYFRLVVSPEDDLAFERIVNTPKRGLGDKAQQTIQATAREFGVTLLEGARIAIDEDRIRG
KGGGQLRMLCENLARWGRMTGDKDVTHMELAEIILDESGYTTMWQNDKTPEAPGRLENLK
ELVKALEGFENLQGFLEHVALIMDNETEESGAKVSIMTLHAAKGLEFPVVFLPGWEDGLF
PSQRSMDESGLKGLEEERRLAYVGITRAEELCTISFAGNRRVFGQWQSALPSRFIDELPE
AHVEVLTPPGLYGGGYGAAAAYGGGSGIETRAAEANVYNSPGWKRLQQRSSQRPVSQPRE
SRTQVIDLEAVSAFEMGQRVFHQKFGYGAITGIEGDKLEIAFEKAGTKKVVARFVHAEDD
VPF
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtttcgatgacatggacgccttcgagggcgcttcgctgtcggcgcgcgccatg
gccgcgcgtccggcaccgtatctcgacgatctgaacgaggcgcagcgcgcggcggtcgag
cagctcgacggcccggtgctgatgctcgcgggcgcgggcaccggcaagaccaaggcgctg
accgcccggatcgtgcacctgctggtctcggggcgggcgcgcccgaacgagatcctgtcg
gtgaccttcaccaacaaggccgcgcgcgagatgaagacccgcgtcggccggatgctcggc
cagcagatcgaggggatgccgtggctcggcaccttccacgcgatctgcgtcaagctgctg
cgccgccatgccgagctggtggggctgaagtcgaacttcaccattctcgacaccgacgat
cagctgcgcttgctcaagcagctgatcgcggccaacaacatcgacgagaagcgctggccc
gcgcgccagcttctgggcctcatcgaccagtggaagaaccgcgcatgggtgccctccaag
gtgcccgcgtccgaggcttcggcctacaaccaccggggcaccgagctctacgagcaatac
caggcccgcctgcgcgagctgaacgcctgcgacttcggcgacctgctgctgcacatggtg
acgatcttccaggcgcatccggacgtgctcgagcaataccagcgctggttccgctacatc
ctcgtggacgagtaccaggataccaacgtggcgcagtatctctggctgcggctgctggcg
ggggggcacaagaacatctgctgcgtcggcgacgacgaccagtcgatctacggctggcgc
ggcgccgaggtgggcaacatcctgcgcttcgaaaaggatttccccggcgcccatgtcgtc
cggctggaacagaactaccgctcgaccgcgcatatcctcgcggccgcctccggcgtgatc
cggggcaacgagggccggcttggcaaggaactctggaccgaggccgagggcggggagaag
gtccgcctgatcggtcactgggacggcgaggaagaggctcgctggatcggcgaggagatc
gaatcgctgcagaagggcacccgggggatcgacccgcattcgctcgacgacatggcgatt
ctcgtgcgcgcctcgcaccagatgcgcgcgttcgaggaccgtttcctgaccattggcctg
ccgtatcgcgtgatcggcggcccgcgcttctacgagcggctcgagatccgcgatgccatg
gcgtatttccggctggtggtctcgcccgaggacgaccttgccttcgaacggatcgtcaac
acgcccaagcgcggccttggcgacaaggcgcagcagacgatccaggcgacggcgcgggaa
ttcggcgtcacgctgctcgagggcgccaggatcgccatcgacgaggaccgcatccgcggc
aaggggggcggccagctgcggatgctgtgcgaaaacctcgcgcgctggggccggatgacc
ggcgacaaggacgtcacccacatggagctggccgagatcattctcgacgaatccggctac
acgaccatgtggcagaacgacaagacgcccgaggcgccgggccggctcgagaacctcaag
gaactggtgaaggcgctcgaaggcttcgagaacctgcagggcttcctggagcacgtcgcg
ctcatcatggacaacgagaccgaggagagcggcgccaaggtctcgatcatgaccctgcac
gcggcgaaggggctcgagtttcccgtggtcttcctgcccggctgggaagacgggcttttc
ccgtcgcagcggtccatggacgagagcggcctcaaggggctcgaggaagagcggcggctg
gcctacgtcggtatcacccgcgccgaagaactctgcacgatctccttcgcgggcaaccgg
cgggtcttcggccagtggcagtcggccttgccctcgcgcttcatcgacgagctgcccgag
gcgcatgtcgaggtgctgaccccgccggggctctacggcggcggctacggcgcggcggca
gcctacggcggcggctccgggatcgagacgcgggcggccgaggcgaacgtctacaactcg
ccgggctggaagcggctgcagcagcgctcgtcgcagcgcccggtcagccagccgcgcgag
agccgcacgcaggtcatcgacctcgaggcggtctcggccttcgagatgggccagcgggtc
ttccaccagaagttcggatacggcgcgatcaccgggatcgagggtgacaagctcgagatc
gccttcgagaaggccggcaccaagaaggtggtcgcccgcttcgtgcacgccgaggacgac
gtgccgttctga
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integrated database retrieval system
