Salipiger profundus: Ga0080559_TMP886
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Entry
Ga0080559_TMP886 CDS
T04656
Name
(GenBank) DNA polymerase-3 subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tpro
Salipiger profundus
Pathway
tpro03030
DNA replication
tpro03430
Mismatch repair
tpro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ga0080559_TMP886
03430 Mismatch repair
Ga0080559_TMP886
03440 Homologous recombination
Ga0080559_TMP886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpro03032
]
Ga0080559_TMP886
03400 DNA repair and recombination proteins [BR:
tpro03400
]
Ga0080559_TMP886
Enzymes [BR:
tpro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ga0080559_TMP886
DNA replication proteins [BR:
tpro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ga0080559_TMP886
DNA repair and recombination proteins [BR:
tpro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ga0080559_TMP886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
APX21682
UniProt:
A0A1U7D0M2
LinkDB
All DBs
Position
387343..387909
Genome browser
AA seq
188 aa
AA seq
DB search
MSETYRFIAIDVETANSDASSICQIGLACVGETGVEEVVTLLIDPRCHFAGMNIQIHGIR
PEHVSGEPLFEEFLDAVGDFLERHALFQHSSFDGRAIRSATEACGRVAAPLQWHDSVRVA
RRAWPEFKGNGGHGLGHLKNALGLDFRHHDAGEDARASAEIVLMAEALMGKPFQDILGSS
PSGSKKRA
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
ttgtcggaaacgtatcggttcatcgcgattgacgtggaaaccgccaactcggacgccagc
agcatctgccagatcgggcttgcctgtgtcggcgagacgggcgtggaagaggtcgttacc
ctcctgatcgacccgcggtgtcatttcgcgggaatgaacatccagatccacggcatccgc
cccgagcacgtctccggtgaacctctgttcgaggaattcctggacgcggttggcgatttc
ctcgagcggcacgcgctgttccagcacagctcgttcgacggccgggcgatccgcagtgca
accgaggcatgcggccgagtggccgctccactgcaatggcacgacagcgtccgtgtcgcg
cgccgtgcgtggcccgagttcaagggcaatggcgggcatgggctcggccacctcaagaac
gcactgggactggacttccgccatcacgatgcgggcgaggatgcccgggcgtctgccgag
atcgtgctgatggcagaggccctgatggggaaaccgttccaggatatacttggctcaagt
ccgagcggatcgaagaaacgagcatag
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