Thalassiosira pseudonana: THAPSDRAFT_10006
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Entry
THAPSDRAFT_10006 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
7451603
NCBI-ProteinID:
XP_002294012
JGI:
10006
UniProt:
B8CCW8
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All DBs
Position
14:complement(978103..983012)
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AA seq
1472 aa
AA seq
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MAAKNNQRSQGNNNGGGGRSSNRRNQGTSYPPQKRSNGSPNQRGQQQYQQGDQQRQQQQQ
QQSQRQGASNQSLPQQAKRHQVHNQPQVQMSSAATSSQLQSPQPKYEWDPQNLQYFLSIR
SKMLQTLFATSLNEGATSATGSVGGGNGSVNGNNNYARSQSARLPMSPTRPTDNTTVNPS
LQPAQGMGRSQSVSNVNSPSRGGDSSQFATPTRNTADNNNTTTTNDEEDDSNNEINMALL
KELLPLPRDYYSIAVKNLLDTPLPLVDTSAADTEGGDTASQGETPTSTTTQLRQPKENES
IYLLSRIYLRVWCHWVRNSIVNTNVERWLSKLITNGGGGALRRYAGVVGGSSCQATNGEN
GNVRLFLLPSHALQTLAALSILTDQYQLWNGEEGEWIRWFDELKGLWVDWIDRREAIQMH
QQQQRGISTTTQKDEKKNDDEANVRQHHNLNQFLPLSPPGPVDLRILSSYGHPLRLRRSV
SLTMKGLTRGGGGEVMSVDEEMREECLMKFLSLGMKELPPTDASTGNNNSESAQRLAVCP
VSSSFYEMLRSNHGVLCEDRRSISFQRPVVSGDNGGREDDPTTLLYHDQSSIKTAKSSSP
SGSDIFYPSSASSSSPSNASQNVQRKPPSSRPIEFPRRVLISTLPLNKERDDYLELHRPS
STDSAHKMSPYSKLMKEAMSSRHEGQSSAMTQSTKKGCTVEVYPVEFRYVVVDGYMSGSD
ASCSNLYTAQGIAHASRVSTAGDVFRDLERNVAPNRTSAHVRLWIKSPSTVTPSANRNAT
QQPGDGYELIDSRPTLFDKKSRNEVPISVEKFLHLDEKSVWNQSAPVVVEILVELRSSPT
ARWVREPLELANRLQVGDFIDAQDNAHKWYEAIVRELTPETVRVHYFGWASKWDGVLPRR
KGVGPKNISPPAALWTHTTPWREKIKVGDEVEVRESASLVQRPKWYKATVIAVSREFDSP
REIAGGADLEQNDENEKGEKVPLVLLSRKRQILVRVPQEKHNVSTTVQPVGNTDGNIPIQ
PPYVRWINLYGEEVCKANTHNTAKKQTNTAPATVSYAVEPERKPVTVMKSFNNIHGTGFV
RESLRGVPPAPGSVGLHNLGNSCYMNSILQCINHIPSITQYFLKGEYQKEVNKNNPLGSG
GKVATAYASFLNDIWTGEYSILAPRLLKQIVGCYAPQFNNNYQHDSQEFHQYLMDGLHED
LNRVKDKPYVEDVEALGMKDDRAAIESWKKHLLRHDSLFVDYTQGLHRSHLTCPSCGKES
IKFDVYSSISLPLVPSKNRPSIPLEDCLDQFAAGEQLDEHNAWYCSGCKKHVCALKLITL
WNTPDVLVLHLKRFTYEKCSQVDGRIIRSKIEDKVDFPIDRLDLTPYVLGPKDPDAPPIY
KLFGVSEHTGATANSGHYTATVRNSKDGNWYRYNDSHVGTTSGDAAVTGGAYLLFYQRAK
GSLRWAGMEKEMMQHKGGFTDAEGWTAIGKKR
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgaagaacaaccaaagaagtcagggaaacaacaatggcggaggagggagaagc
agcaatcgaagaaatcaaggcacgtcatatcctcctcaaaagagatccaacggatctcct
aatcagagggggcaacaacaatatcagcaaggggaccagcaacgtcaacaacagcagcag
cagcaatctcagaggcaaggagcgtcaaaccagagtctaccgcagcaagccaagaggcac
caggtgcacaatcaaccgcaggtgcaaatgtcatcagctgctacatcgtctcaactacaa
tctccccaaccaaaatacgaatgggatcctcaaaacctacaatactttctttccattcgt
tccaaaatgcttcagactttatttgccacctctttgaatgaaggtgcaacgagtgctacc
ggcagtgttggcggtggtaacggaagtgtcaatggcaacaacaactacgcaagatctcaa
tcagcacgtcttcccatgtcacccacccgtccaaccgataacacgactgtcaatccatca
ttgcaaccggcacaaggcatgggaagaagtcaatcagtttctaatgtcaactctccatct
cggggaggggattcttcgcagttcgcgacgcccactcgcaacactgccgataacaacaac
actacaactacaaatgatgaagaagatgattccaacaatgaaataaacatggcactgtta
aaagagctacttcctcttccaagagattattactctattgctgtcaagaacttgctcgat
actccgttgccgttggttgatactagcgctgccgatactgagggaggggatactgcatct
caaggggaaacacctacatctacgactacgcagttacgtcaacccaaagaaaacgaatca
atatacctcctttctcggatctacctccgtgtttggtgccattgggtgaggaattcgatt
gtaaataccaatgtggaacggtggttgtcaaagctcatcactaacggtgggggtggcgcc
ttgaggaggtatgcgggagtggtgggaggaagctcatgtcaagccacaaatggggagaac
ggcaatgtcaggttgttcttactgccgtcgcatgcgctgcagacattggcagctctgtcg
atattgacggatcagtatcagttgtggaatggggaggagggggagtggataagatggttt
gatgagttgaaaggactatgggttgattggatagatagacgagaggcaattcagatgcat
caacaacagcaacggggtatttcaacaacgacacaaaaagatgaaaagaagaacgatgat
gaagccaacgttcgtcaacaccacaaccttaatcagtttctaccactctcccctcctggt
cctgttgacctacggattctttcaagctacggccatccacttcgattacggcgttctgtt
tccttgacaatgaagggattgacaagagggggcggcggtgaagttatgagcgtggacgag
gagatgagggaggaatgccttatgaagtttctctcgttgggaatgaaagagctgcctcca
actgatgcaagtacaggaaacaacaacagtgagtctgcacagaggttagcagtctgtccc
gtctccagttccttttacgaaatgctccgctcaaatcatggagtattgtgcgaagatagg
cgttcaatatcctttcagcgaccagttgtcagtggtgataacggagggagagaggacgat
cccacgacgttattgtaccatgatcaatcatcaatcaaaactgctaagtcttcgtctcca
agtggatctgatatcttctatccatcctctgcatcatccagttcaccatccaacgccagt
caaaatgtccaacgcaagccaccgtcatctcgtccaattgaattccctcgccgtgtcttg
atatcaacgcttcctctaaataaggagagagatgattatcttgaacttcatagaccttcg
tctaccgatagtgcccacaaaatgtcgccatattcaaagctgatgaaggaagcaatgtca
agtcgccatgagggacaaagctcggcaatgacacaatctacaaagaagggatgcacagtg
gaagtctacccagttgaatttcgttatgtagtagtagatggatatatgtccggatcagac
gcaagctgcagcaacttatacactgctcagggaattgctcatgcatctcgtgtctctaca
gctggtgatgtgtttcgtgatttagagcggaacgtggcacccaatcgaaccagtgcacat
gtgcgtctttggataaagagtccttccaccgttactccatccgcgaatagaaatgcaaca
cagcagccgggagatggatatgagttgattgactcgcgaccgactttgtttgacaagaag
tcgaggaacgaagtgccaatatctgttgagaagtttctacacttagatgaaaagagtgtg
tggaatcaatctgctcccgttgtggtagaaatactcgttgaacttcgtagtagtcccaca
gctcgatgggtgagagagccactggagttggccaaccgattacaggttggggacttcatt
gacgcccaagacaacgctcacaagtggtacgaagcgattgttcgagagttgacaccagaa
acagtccgcgttcattactttggatgggcttccaaatgggatggagtgttaccacgaaga
aaaggagttggaccaaagaacatatctcctcctgcagctctgtggacacacacaacgcca
tggagggaaaaaatcaaagtgggagatgaagtagaagtgagagagtcggcttcgttggtg
caacggccaaaatggtacaaagcgacagtgattgctgtgagcagggaattcgatagtcca
cgagagatcgcgggaggtgctgacttggaacagaatgacgaaaatgaaaaaggcgaaaag
gttcctctggtactactcagtcgtaaacgacaaatacttgtcagagtgccccaggagaaa
cacaatgtatccacaactgtgcagccggtagggaacacagatggcaacattcccatccag
ccgccttacgtacgatggattaatctatatggagaagaagtatgcaaagccaacactcac
aacacggcaaagaagcagaccaacactgctcctgcaaccgtcagttatgcggtggaacca
gaaaggaagcctgtcactgtcatgaaatcattcaacaacatacatggaacaggatttgtc
cgtgagtctctccgaggtgttccaccggctcctggatccgttgggctccacaatttgggc
aacagttgctatatgaactccatccttcaatgtataaaccatatcccatcaatcactcaa
tatttcttgaagggtgaataccagaaggaagttaacaagaataatcctcttggaagtggt
gggaaagttgcaactgcgtacgcttcttttctgaacgatatctggacgggagagtattca
atattggcaccgcggttgctgaagcaaatagtgggatgttatgcaccgcagttcaataac
aactatcaacacgatagccaggagttccatcaatacttgatggatgggctacacgaagat
ctaaatcgagtgaaggacaagccatacgtcgaggacgttgaagcccttggaatgaaagac
gatagagcagctattgagtcgtggaagaagcatttacttcgccacgatagtctcttcgtc
gactatactcaaggattgcatagaagccatctcacctgcccaagctgtggtaaggagagt
atcaagtttgatgtttactcgtcaatttcgctgccattagtaccttcaaagaataggcct
tcaatcccactcgaggactgcctcgaccaattcgcagctggagaacaattggatgaacac
aacgcgtggtactgctcaggttgcaagaagcacgtttgtgcattgaaattgattacgttg
tggaacacaccggatgtgctggtactccatctcaaacgatttacgtacgaaaaatgctcc
caagttgacggtcgtatcataagaagtaagattgaggacaaagtcgacttcccgatcgat
cgtttagatttgactccttatgttctcggtccaaaagatcccgacgctcccccaatctac
aagctattcggagtcagtgaacacactggagccacggctaacagtggtcactacacagct
accgtacgaaactcaaaggacggaaattggtatagatataacgattcccacgttggcact
acttccggcgatgctgcagtgactgggggggcgtacttgctgttttaccagcgagcgaaa
ggatctctacgatgggccggaatggaaaaagagatgatgcagcacaagggcggatttact
gatgctgagggatggactgcaataggaaagaagcgatag
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