Thalassiosira pseudonana: THAPSDRAFT_10077
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Entry
THAPSDRAFT_10077 CDS
T01078
Name
(RefSeq) hypothetical protein
KO
K03094
S-phase kinase-associated protein 1
Organism
tps
Thalassiosira pseudonana
Pathway
tps03083
Polycomb repressive complex
tps04120
Ubiquitin mediated proteolysis
tps04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
THAPSDRAFT_10077
04120 Ubiquitin mediated proteolysis
THAPSDRAFT_10077
09126 Chromosome
03083 Polycomb repressive complex
THAPSDRAFT_10077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_10077
04121 Ubiquitin system [BR:
tps04121
]
THAPSDRAFT_10077
03036 Chromosome and associated proteins [BR:
tps03036
]
THAPSDRAFT_10077
Membrane trafficking [BR:
tps04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
THAPSDRAFT_10077
Ubiquitin system [BR:
tps04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
THAPSDRAFT_10077
Cul7 complex
THAPSDRAFT_10077
Chromosome and associated proteins [BR:
tps03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
THAPSDRAFT_10077
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
THAPSDRAFT_10077
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
Motif
Other DBs
NCBI-GeneID:
7441967
NCBI-ProteinID:
XP_002294049
JGI:
10077
UniProt:
B8CD48
LinkDB
All DBs
Position
15:<186718..>187809
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AA seq
176 aa
AA seq
DB search
MDGDDAHGTVKLVSKEGDTFEVPIEVAKLSNLVVTTLGEEDDYDDDDDNMVEIPLPNVKS
SVLAKVIEYCTHYNQDPMTPITTPLKSNRIEEIVQEWYAHFVDVEQILLFELVTAANFMD
IKALLDLTCLAVSVLIKGKSAEEIRRIFNISNDFSPEEEAQVSKENQFTDGTSSSS
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atggacggagacgacgctcatggaactgtcaaattggtgagcaaagaaggagacaccttc
gaagtccccatcgaagtcgccaaactgtccaacctcgtagtcaccaccctcggcgaagaa
gatgactacgacgatgatgatgacaacatggtggagattccccttccgaatgtcaagtcg
agtgttttggccaaggttattgagtattgtactcattataatcaggatcctatgacacca
atcacaacccctctaaaatcaaaccgcatcgaggaaatagtccaagagtggtatgcacac
tttgtagacgtggagcagattttactatttgaattggtgacggcggcaaactttatggat
attaaggcattgttggatttgacttgtttggcggttagtgtgttgattaagggcaaatca
gcagaagagattcgtagaattttcaacattagcaatgacttttcaccggaggaggaagct
caagtgtctaaggagaatcagttcactgacgggacttcgtcaagcagttag
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