Thalassiosira pseudonana: THAPSDRAFT_10102
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Entry
THAPSDRAFT_10102 CDS
T01078
Name
(RefSeq) predicted protein
KO
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00900
Terpenoid backbone biosynthesis
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
Module
tps_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
THAPSDRAFT_10102
Enzymes [BR:
tps01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
THAPSDRAFT_10102
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Motif
Pfam:
YgbB
Motif
Other DBs
NCBI-GeneID:
7441979
NCBI-ProteinID:
XP_002294062
JGI:
10102
UniProt:
B8CD73
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All DBs
Position
15:273817..274822
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AA seq
263 aa
AA seq
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MTKRTTTLLALLLTASSAYSNAFSLPSITQQQQRQSSPRSLSTSLTSLSATEAETEAEIS
SILRPSYAIESIPLRIGHGFDIHRMVPLEEAGQPVVIGGVVIDHEDQKWTDKEGTYTGTP
NSIYKTQLGVIAHSDGDVIYHSLVDAIFGALTLPDIGQVFQDTDPRWKGCDSSKFMEHAY
EVMKYYGYQIGNVDVTLILERPKVAGFKPRMKENIVRLLHTTDGRVNIKARTHERVDSVG
ELRSLSCHVVVTLEKVVGAEEED
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagcgtactaccaccctcctagccctcctcctaacggcctcctcagcctacagc
aacgccttcagcctcccctccatcacgcaacaacagcaacggcagtcttcaccgcgaagt
ctctctacttcgttaacgtcactctcggccaccgaggcagaaacagaggcagaaatctcc
tccatcctacgaccatcgtacgctattgaatccatcccacttcgtattggacacgggttt
gatattcacaggatggtgcctcttgaggaggcggggcagccggtggttattgggggtgtg
gtgattgatcatgaggaccaaaagtggaccgacaaagaaggaacctacacaggaacaccc
aactccatctacaaaacccaactaggcgtcatcgcccactccgacggagacgtcatctac
cattccctcgtcgacgccatcttcggcgccctcaccctccccgacattggccaagtcttc
caagacaccgatccacgctggaagggatgcgactcctccaaattcatggagcatgcgtat
gaagttatgaagtattatggatatcagattgggaatgtggatgttacgttgattttggag
aggccgaaggttgcggggtttaagccgaggatgaaggagaatattgttaggttgttgcat
actacggatgggagggtgaatattaaggcgaggactcatgagagggtggatagtgtggga
gagttgaggagtttaagttgccatgtcgtggttactttggagaaggttgtgggtgctgag
gaggaggattaa
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