Thalassiosira pseudonana: THAPSDRAFT_105
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Entry
THAPSDRAFT_105 CDS
T01078
Name
(RefSeq) eukaryotic translation initiation factor 2 alpha subunit
KO
K03237
translation initiation factor 2 subunit 1
Organism
tps
Thalassiosira pseudonana
Pathway
tps04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
THAPSDRAFT_105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
tps03012
]
THAPSDRAFT_105
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_105
Translation factors [BR:
tps03012
]
Eukaryotic type
Initiation factors
eIF-2
THAPSDRAFT_105
Membrane trafficking [BR:
tps04131
]
Autophagy
ER-phagy
ER stress-related proteins
THAPSDRAFT_105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EIF_2_alpha
S1
DUF6576
Motif
Other DBs
NCBI-GeneID:
7449310
NCBI-ProteinID:
XP_002292230
JGI:
105
UniProt:
B8C817
LinkDB
All DBs
Position
9:395795..397051
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AA seq
338 aa
AA seq
DB search
MTKTATDAVPTTLDAPEEGAFRVYLAEDKHNLDCRFYEAKYPEIESLVMVNVRTIADMGA
YVSLLEYNNIEGLILLSELSRRRIRSINKLIRVGRNEVAMVLRVDKDKGYIDLSKRRVSP
EDVAACEDKFNKAKAVHGVLRHLADRRKFYLEDLCERIAWPLYRKYGHAYDAFKIALADE
AASGGEAAENDPFTSLDVPPDVIEELKLYIRRRLAPQPIKIRADVEVSCFTYDGIDAIRD
ALFAGIAVGTENSPIKIRLIAPPIYVLSTMTLEKEAGIALLQKSIDVILEKISAKGGKMD
VKMAPKAVSLKEETELQAMMERLELENREVEGDEPEED
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaacagccacagacgccgtccccacaaccctcgatgcacccgaagagggcgcc
tttcgcgtctacctggccgaagacaaacacaacctcgactgccgtttctacgaagccaaa
taccccgaaattgaaagtctcgtcatggttaacgtccgtaccatcgccgatatgggtgcc
tacgtctctctcctcgagtacaacaacattgaaggcctcatcctcctctctgagttgtct
agacgtcgcatccgctcaatcaacaagttgattcgcgtggggaggaacgaagtcgcaatg
gtcttgcgtgtggataaggacaagggctatatcgatcttagtaaacgtcgcgttagtccc
gaggatgtagcggcctgtgaagacaagttcaacaaggccaaggccgtccacggcgtcttg
agacacttggccgaccgtcgaaagttttacttggaagatttgtgcgaacgtattgcgtgg
cctttgtatagaaagtatgggcatgcctatgatgccttcaaaattgcattggcagatgag
gctgcgtcgggaggagaggctgcggaaaatgatccgtttacgagtttggatgtccctccc
gatgtgattgaggagctcaagttgtatattcgaaggaggttggctccacagcctatcaag
atacgagcggatgtggaggtttcgtgtttcacgtatgacgggattgatgctattcgtgat
gcactctttgcggggattgctgtgggtacggaaaactctcccattaagatccgattgatc
gctcctcctatctacgtcttgtcaaccatgactttggagaaggaagctggaattgcactg
ttgcaaaagtcgattgatgtcattcttgaaaagatctcggccaaggggggtaagatggat
gtgaaaatggcaccaaaggctgtgagtttgaaggaggagacggagttgcaggccatgatg
gagaggcttgagttggaaaatagggaggtggagggagatgaacccgaggaagattaa
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