Thalassiosira pseudonana: THAPSDRAFT_10628
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Entry
THAPSDRAFT_10628 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NAD_binding_10
NmrA
DapB_N
Epimerase
Sacchrp_dh_NADP
DFP
Gp_dh_N
Motif
Other DBs
NCBI-GeneID:
7444199
NCBI-ProteinID:
XP_002294476
JGI:
10628
UniProt:
B8CE29
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Position
17:complement(265590..267739)
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AA seq
686 aa
AA seq
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MSLLHVHRRSRPSACYSRIQMQIMIISALLLLLSCNALSPLLSTTTVTTSNVCGGGSTNG
HNTCPTHHNSLRRSLSRSQQAQSNNPSSSLYMVGSSFSSDDGNTPQRHPKPKPTKQLDKD
YLTSDLDVPTITQLQLSPTAIIPPRPKIVVFGASGRIGRRVLRRLLSSGVDMDVVAYVRD
EKKLERVLYEEGLGGMSTVGGRRGRKNDKGPKLQVVVGNLFSNVDVFRGQFETEEEKRVL
DLWVDKAANYFRSIGDDSNSTTNITSSMISDEKVKTDIDIMEANNEAIQEAIAGSTIIVS
CVGTSRQTNFYTDYLCVPFFRILRKDVSKWCSDPRHPYYVNYLSTKKILEEAENEQRRRE
AMIQFQMEKMKLEEEYEKRRTKKEEEGFESSIAANFKKRRGRFGSDTNYYDGTSLDLPED
VQLPTSTDRIKLIRISDANVGRNPWRLGSIVTNVFRSVVFRYHEMGEKLLEGSEVVDTIV
LRAGELTDEERNTNHTSLQLSTDGKVATPCLVGRDDVADIAVVAALTTTSNPKLLFGNDT
DTTDNSEDEGGTDNATIQATSHYTWALRWTGQHLSPPQGLRPDGLSTAALCFVKAIKAEI
ASTRQKRVESRRQERMKQYHGGNELVRIQNWLKRRLNSKPHALSAALAVYMTLSLISWFT
IWPPLVEAFGRARRFNVPQLLTKLLS
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtcactccttcacgtgcaccgacgatctcgtccatctgcttgctattcgcgaatccaa
atgcaaatcatgatcatctcagcgttgttacttctactttcatgcaatgctctttcgcct
cttctatccacaacaacagttactacgagcaatgtatgcggaggaggcagcacgaatggt
cacaacacatgtccaactcatcacaactctttgagaaggtcactctctcggtctcaacag
gctcaatccaacaatccatcatcgagtctctacatggtcggttcttccttctcttccgac
gatggtaacactcctcagcgacacccaaaaccaaagcccaccaaacaactcgacaaagat
tacctcacctcggatctcgatgtacccacaatcacacaattgcaactatcgcccactgcc
atcattcctcctcgtcccaaaatagtggtattcggtgcctctggtagaatagggagaaga
gttctacgacgattgttatcatcgggtgtggatatggatgtggttgcatacgtccgggac
gagaagaagttggaacgagtgctttatgaggaggggttgggaggcatgtctactgttgga
ggaagaagagggagaaagaatgataaagggccaaagctgcaagtcgttgtcgggaatttg
ttttcaaatgtggatgtgttcaggggtcaattcgagaccgaggaagagaagagggtgttg
gatctttgggtagacaaagctgcaaactactttcgctctatcggagatgattcaaactca
acaacgaacattacttcctccatgatatctgatgaaaaggtcaagacagacattgatatt
atggaggcaaacaatgaggcaatccaggaagccatcgcgggaagtacaatcatcgtatcc
tgcgtggggacctctcgtcaaactaacttttacactgattacctttgtgtgcctttcttt
cgcatccttcgtaaagatgtgagcaaatggtgttctgatccaaggcatccatactatgtg
aattatctcagtactaaaaagattcttgaagaggcagagaatgagcaacggagaagagaa
gctatgattcagtttcagatggaaaagatgaaattagaggaagaatatgagaagcgaagg
acaaagaaggaagaggaggggtttgagagcagtattgctgctaatttcaagaagagacgt
ggaaggtttggaagcgacacgaattactatgatggaacatcgttagatttgccagaggat
gtgcagcttccaacttctactgataggatcaaacttattcgcatcagcgatgcaaacgtg
ggacgaaatccatggaggttgggtagcattgttacaaatgtctttagatcggtggtgttt
aggtatcatgagatgggggagaaactgttggagggaagtgaggtggttgacacgattgtg
ttgcgagctggtgaactgactgatgaggaaagaaacacgaatcacacgtcccttcaactg
agcacagatggcaaggttgcaacaccttgccttgtcggacgagacgatgtcgctgatatt
gccgtggttgcagcactcacaacgacttcgaacccgaaactattatttggtaatgatact
gacacaactgacaactctgaggatgaaggaggcactgataatgcaacaatacaagcaaca
tcgcattatacgtgggcgttacgatggactggccaacatctcagccctccgcaagggtta
aggccggatggattatccacggcagcgctttgctttgtgaaggcaatcaaggcagaaatc
gctagtacacgtcaaaagagagtagagagcaggaggcaggaacgaatgaaacaatatcac
ggaggaaatgaacttgtacgaatacaaaattggctcaagagacgcctcaattccaagccg
cacgcgttgagtgctgccttggctgtgtatatgacactatcattgatcagttggtttacc
atctggccaccgctagtagaggcatttggaagagcaaggcgtttcaatgttccccaattg
cttactaagttgttatcatag
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