Thalassiosira pseudonana: THAPSDRAFT_11085
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Entry
THAPSDRAFT_11085 CDS
T01078
Name
(RefSeq) predicted protein
KO
K20291
conserved oligomeric Golgi complex subunit 4
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_11085
Membrane trafficking [BR:
tps04131
]
Endosome - Golgi transport
Tethering complex
Conserved oligomeric Golgi (COG) complex
THAPSDRAFT_11085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COG4_C
COG4_m
Motif
Other DBs
NCBI-GeneID:
7446259
NCBI-ProteinID:
XP_002296901
JGI:
11085
UniProt:
B8LD07
LinkDB
All DBs
Position
19
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AA seq
1002 aa
AA seq
DB search
MAPSETPPDLPSTLDCKSPHDALLAVARSSEELACKLAEELRASLTGGRTKSTDVPSEDA
SRYPIPLPKSLREAPRPVDNDSTSSSSTMTPSRALHRANPTHPLTRSAIAAESILSSLSK
IASGGSEASSEMRALESQRSELDREAMDIECALRIREGCARGGDSLMGRRYGDAARAVRD
VNDVLYGRNNGGGCSERAKELAGEEALQSHARTVEVLRRAVGERYETAVQNGDVAGLSEL
TPLLGMLDMAQLGVRLYLQYSQSVLTREMNLDAPPVIDVDSVEREEGMSRAAMRRRAEER
QKQHINMSTPQKLARIYNAAVTHLRHHLPMVAYALGEADGDAELVQLVHVEAEKRVVDIM
RGYMNEKELGRTVRRAEVVAGKIEDRYTGSGGGGGGGLEDGNIANMIMGFAGDSSISGGV
TTSDMIARRNAATRDDCGFTIEVGNLSDVDAALEEWALVMQHTESYERFLRHAVDEVGKA
RKLRRDQKRDEKRRLKELKEEGKDSIGNPRKSAKGSAAVDDEEEAEEEDSIEILPPHTQL
NEVAAEIGGNFSSLERCLLLAGMQRAFVNANFPDDSTFSPVAIGSTSDYGAGSRALQTNL
VEECLYAARRSTLRAFATGHVGTASAAANVCVDILGRVLLEVLSRRAELGASLLKPGEGL
LPGESGLGQAALSFAKSTAGKGLRGVQGAAARAGASKGIMGDMSEETTEALRTRTLLGVA
RAAANFNDLEVVADYTKRLEANFLKEIDAGYPRGHDTEQLRMCIKGLSGVVESFSQASER
SMERLVSTLLPRVRQIVNDAVGQEGGGTSAVAASNFLGSPVLTGGATVVTSTHLDYDLDD
QAFELAQISEGYIGRMCSSLDELMEPMRVHLVSKLSDDLLIGILGGVSKRLEAVIRKSKF
TPLGAISLDSDVRYLMNFAKDRIDSPELKSNVTLCKSCPPLARLNQIALLLNVDDLEDVL
DLISVSKRKGIWDLKLDDAKVLLSLRSDFEGAKVNDLLQIDE
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggcaccctccgaaacaccccccgatctcccctccactctggactgcaaatccccccac
gatgcgttgttggcagtagctcgttcgagcgaggagttggcatgtaagctggccgaggag
cttcgcgcttcgttgaccggcggacgaacgaagtcgaccgacgttccatcagaggatgca
tcgagatatccaattccgttgccgaaatcgctgcgtgaggctcctcgtccagtcgacaac
gacagcacgtcgtcatcgtcgaccatgaccccgtctcgagccctccaccgcgccaaccca
acccatccgctgacccgctccgccatcgccgccgaatccatcctgtcctccctctccaaa
atcgcctcgggtggatccgaggccagttccgaaatgcgagctttggaatcgcaacggtcg
gagttggaccgagaagcgatggatattgaatgcgccttgaggattcgagaggggtgtgcg
aggggaggggacagtctgatgggacggaggtatggcgatgcggccagggctgtgagggac
gtgaatgacgtgttgtacgggaggaataatggcggcgggtgcagcgaacgcgccaaggag
ttggcaggagaggaggcactccaatctcacgctcggacggtggaggtgcttcgtcgagcg
gtcggcgaacgatacgaaaccgccgttcaaaacggggatgtggccggattatcggaattg
actccccttcttggcatgttggatatggcgcagttgggtgtgaggctgtacctccaatat
tcgcagtcggtactgacacgggagatgaatctcgacgcaccccccgtgatcgatgtcgat
tccgtagaaagagaagagggaatgtcccgagccgccatgagacggagggcagaagaacga
cagaaacaacacatcaacatgtccactcctcaaaaactggcacggatctacaatgcggct
gtcacgcatttaagacatcatttacccatggtggcgtatgcattgggagaggcagatggg
gatgcggaattggttcaattggtgcatgtggaggcagagaagagggtggtggatattatg
agggggtatatgaacgagaaggagttggggaggacggtgaggagggcggaagttgtggct
gggaagattgaagatcggtataccggtagcggtggtggtggaggaggggggttggaagat
gggaatattgccaatatgatcatgggatttgcaggcgattcatccatcagtggaggagtc
acgacgtcagatatgattgcaagacgaaatgcagctacccgagatgattgtggattcacc
attgaagttggcaatttgtcagatgtggatgcagcgttggaagaatgggctttggttatg
cagcataccgagtcatacgagaggtttcttcgtcatgctgtggatgaggttggcaaggcg
aggaagttgaggagggatcaaaagagggatgagaaacggagattgaaggagttgaaggag
gaggggaaggattctattgggaatccgagaaaaagtgccaagggttcggctgctgttgat
gatgaggaggaagctgaggaagaggatagtattgagatcttgcctcctcacactcagctg
aatgaagttgctgcagagattggtggcaacttttcgtccttggaacgatgcctccttctc
gcagggatgcaaagagcttttgtgaatgccaactttccagacgactcaacattctctccc
gttgctattggaagtacttcggattatggtgcaggatcacgagcactgcagacaaatctc
gtagaggagtgtttgtacgctgctcgtcgttcaactttgagggcatttgcaactgggcac
gtcggtactgcatcggctgcggccaatgtttgcgtggatattcttggccgtgtgctgttg
gaggtattgtctcgtcgggccgagttgggagctagtttgctcaagcccggagaggggctg
ttgcccggtgagtctggattgggacaagcggcactgtcgtttgcaaagtctacggctggt
aaaggattgagaggtgtgcaaggtgctgcggcgagggcgggtgcgagcaagggaatcatg
ggggatatgagcgaggagactaccgaggcgttgaggacgagaacgttgttgggtgtggca
cgagctgctgccaatttcaatgatttggaagttgtggccgattacactaaacgattggaa
gcgaacttcttgaaggagattgatgctggctaccctcgaggacatgataccgaacaacta
cgaatgtgtatcaaggggctcagtggagtggtggaatccttctctcaggcttctgagagg
tcaatggaacgtcttgtgtctactctcctgccacgcgttcgacagattgtgaacgatgcc
gttggtcaggagggtggaggaacctctgccgttgcagctagcaactttttgggtagtcca
gtgttgacaggtggagctacggtggtaacttctactcatttggattatgatttggatgat
caggcatttgaactggcgcagattagtgaggggtacattgggcgtatgtgctcgagcttg
gatgaactaatggagccaatgagagtacatttggtatcgaagctttcagatgatttgctt
attggcatattgggtggtgtctccaagcgtctggaggctgtcattcgcaagagcaaattc
acaccgttgggtgccatcagtctggactcggacgttcgctacctgatgaactttgccaaa
gatcgcattgactcgccagaactgaaatccaatgtcactctctgcaaatcatgcccacct
cttgctcggctaaaccaaattgctttacttcttaacgttgatgatttggaggatgtcttg
gatctgatatctgtctcaaagcgtaaaggaatctgggatttgaagctggatgatgcaaag
gtgctgctgagtctgaggtcggatttcgaaggtgcaaaagtgaacgacttgcttcaaatt
gatgagtaa
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