Thalassiosira pseudonana: THAPSDRAFT_11211
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Entry
THAPSDRAFT_11211 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reprolysin_5
Reprolysin_3
Reprolysin_4
Reprolysin_2
Motif
Other DBs
NCBI-GeneID:
7444322
NCBI-ProteinID:
XP_002297061
JGI:
11211
UniProt:
B8LDD3
LinkDB
All DBs
Position
19
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AA seq
688 aa
AA seq
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MPRLSALAVLLLALPASRASQHDRRILNPADSVGQQMKQLHANGNAQARFTIHSEISPGK
ELALDVIEAVNPAVTSETIIKDNNGYESKVDGSSLYTLLVSDTSTADGADTFALLAVNPL
TDELHGIVEKKGNNGNGKGNSAYKINQSKDVNGGKATAVEETNTEAPAWSCAVDGHFESE
DDARKLYDGDEQGHDHEHHHDHEHHHHHEDHTASIMENLSSSLRGTKVNPLGKRRLQSGT
NYNYQVDIYMEIDQSLVDKNGGTFVGAVNYVNSVITAANVVYEKEIDTHLFVSYIVQSAL
YDTATSTSNALDTMRANFASSPWHTAGIDLHHAILGKSLGGGIAYVGVLCNSQYGFGLSA
SINGNFRSLDYSVVWDLMVVMHEIGHNFNSGHTHQAYTPVIDTCGTTCPASSSSSTGWAT
MMSYCHGCSGGYSNMLYTFGGSYSGSGTKSDLSNWVEYPDLIPNYNGDAVSVDPQRAAHR
MYVHASTRGTCLNLPVNPTPQPTPQPVSPAPTNQPVTPAPVTPAPTPQPVTPAPTPQPVT
PAPVTPSPTNMPVTQSPTNPPTPNPTNQPVTPSPTRNPVTASPTVPVNCEAASISQYQCI
AAPNCNWVKFRGSKYCEFSPVAPSPPTPTPPSPTPPTTTPQPTPNPTQPSGGGGGGGSCL
PRGSSCDLKASNPCCGSCSGNGRWGSCS
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtctctctgcccttgccgtgctgctcctggcactaccggcctctcgcgcctct
cagcatgaccgtcgcatcctcaaccccgccgacagcgtaggacaacaaatgaagcaactc
catgccaatggcaacgctcaggctcgcttcaccattcactccgagatctctcccggtaaa
gaacttgcattggatgtcatcgaggcagtcaatccagcagtgacgtccgagacgatcatc
aaggacaacaacggctacgaatctaaagtggacggcagttcattgtacactcttctcgta
tccgatacctccaccgccgatggagctgataccttcgcgttgttggccgtgaatccactc
acggatgaacttcacggaattgtcgagaagaagggcaacaacggcaacggtaagggcaat
agtgcctacaagatcaaccagtccaaggatgtcaacggtgggaaggccactgcggtggaa
gagacgaatacggaggctcccgcttggagttgcgcggtggacggacattttgagagtgaa
gacgatgctagaaagttgtatgatggtgatgagcagggacacgatcatgagcaccaccac
gaccatgaacaccatcatcatcacgaagaccacaccgcatccatcatggagaatctctcc
tcctctcttcgcggtaccaaggtcaaccctcttggcaaacgtcgccttcaatcgggtacc
aactacaactaccaagtcgatatatacatggagattgaccagtctctggttgacaagaat
ggaggtacttttgtgggagctgtcaactacgtgaattctgtgattacggctgcaaatgtg
gtgtacgagaaggaaattgacactcacctgttcgtcagctacatcgtccaaagtgccctt
tacgacactgccacatcgacatccaacgcactcgataccatgagggccaactttgcgtca
agcccttggcataccgctggtattgacttgcatcatgccatcctcggcaagagcctcgga
ggaggaatcgcctacgttggtgtgctctgcaattcccagtatgggtttggtttgtcagct
tcaattaacggaaactttaggagccttgattacagtgttgtttgggatttgatggttgtt
atgcatgagattggccacaacttcaacagtggccatacccaccaggcttacactcccgtg
attgatacttgtggaactacctgccctgcttcttctagcagtagtacaggatgggcgacg
atgatgtcgtactgccatggatgctctggaggatactcaaacatgctgtacaccttcgga
ggctcatattctggatctggaaccaagtctgacctctccaattgggttgaatatcccgac
ctcatcccgaactacaacggagatgcagttagtgtcgatccacagagagcagctcatagg
atgtacgtccatgcgagtactcgtggaacgtgcttgaatcttcctgttaatcctactcct
cagcccactcctcagccagtttcaccagcacccaccaaccagcccgtaactccggctcca
gttactcctgcacctactcctcaacccgtaacccctgcacccacacctcaacctgttacc
ccggctccagtcacaccttctccaaccaacatgcctgtgacccaatctccaaccaatcct
cccactcccaacccgaccaatcaacccgtaactccatcacccactcgtaatcctgttact
gcttcgcctaccgtacccgtcaactgcgaggctgcttccatctcccagtaccaatgcatc
gctgctcccaactgcaactgggtgaagtttcgtggtagcaagtactgcgaattctctccg
gtagctccttctcctcccaccccgactcctccatcacccacacctcctaccacgacgcct
cagcctacccctaatcctacgcagccttcgggaggaggaggaggaggaggatcatgtctc
cctagaggaagctcttgtgatctcaaggcttcaaatccttgttgtggatcttgctctgga
aacggaaggtggggaagttgctcgtaa
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